RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 METTL14Q9HCE5 456 aaKnown RBP18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 PCDHA11Q9Y5I1 949 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 COL4A6Q14031 1691 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 GOLGA6L19H0YKK7 550 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 AFF1P51825 1210 aaKnown RBP18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 NCAPHQ15003 741 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 FRMD5Q7Z6J6 570 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 LRRC43Q8N309 656 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 TMC2Q8TDI7 906 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 PARD3BQ8TEW8 1205 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 EEF2KMTQ96G04 330 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 PPP1R10Q96QC0 940 aaKnown RBP18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 THAP9Q9H5L6 903 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 SLC38A7Q9NVC3 462 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 TBC1D13Q9NVG8 400 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 INPP5FQ9Y2H2 1132 aa18.51■□□□□ 0.55
RPRD1A-209ENST00000590898 CARNS1A5YM72 827 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 IKBKBO14920 756 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 XPOTO43592 962 aaKnown RBP18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 GATMP50440 423 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 SCNN1GP51170 649 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 MARSP56192 900 aaKnown RBP18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 CLDN10P78369 228 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 BTG3Q14201 252 aaPredicted RBP18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 FAM212AQ96EL1 285 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 ZMAT2Q96NC0 199 aaKnown RBP18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 FNBP1Q96RU3 617 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 PDE11AQ9HCR9 933 aa18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 COLQQ9Y215 455 aaPredicted RBP18.5■□□□□ 0.55
RPRD1A-209ENST00000590898 POMCP01189 267 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 CYP3A5P20815 502 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 MYL5Q02045 173 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 LRIT3Q3SXY7 679 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 FAM109BQ6ICB4 259 aaPredicted RBP18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 CACTINQ8WUQ7 758 aaKnown RBP18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 CXCL16Q9H2A7 254 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 ARMCX3Q9UH62 379 aaPredicted RBP18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 SMTNL1A8MU46 457 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 GRXCR1A8MXD5 290 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 KRT13P13646 458 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 SMAD3P84022 425 aaKnown RBP18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 RNASELQ05823 741 aaKnown RBP18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 DSC1Q08554 894 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 NAB2Q15742 525 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 RAB30Q15771 203 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 FAM114A1Q8IWE2 563 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 HSD3B7Q9H2F3 369 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 UBQLN1Q9UMX0 589 aaKnown RBP18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 PLAGL2Q9UPG8 496 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 NFE2L3Q9Y4A8 694 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 MYO9BQ13459 2157 aa18.49■□□□□ 0.55
RPRD1A-209ENST00000590898 VAMP7P51809 220 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 AP3M2P53677 418 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 BFSP1Q12934 665 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 TMEM132DQ14C87 1099 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 PAN2Q504Q3 1202 aaKnown RBP18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 JADE1Q6IE81 842 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 IRF2BP1Q8IU81 584 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 WDR49Q8IV35 697 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 FIBCD1Q8N539 461 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 CLP1Q92989 425 aaKnown RBP18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 KIF12Q96FN5 646 aa18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 FAM193BQ96PV7 902 aaPredicted RBP18.48■□□□□ 0.55
RPRD1A-209ENST00000590898 RABGGTBP53611 331 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 WNT7BP56706 349 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 TUSC3Q13454 348 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 DUOXA2Q1HG44 320 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 GLRA4Q5JXX5 417 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 CCDC127Q96BQ5 260 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 TMEM175Q9BSA9 504 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 CWH43Q9H720 699 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 INTS13Q9NVM9 706 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 MSRAQ9UJ68 235 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 DDHD2O94830 711 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 ALDH2P05091 517 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 DLATP10515 647 aaKnown RBP18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 TNNI1P19237 187 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 ZNF280BQ86YH2 543 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 EFCAB13Q8IY85 973 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 COLGALT2Q8IYK4 626 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 BEST2Q8NFU1 509 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 PLEKHO2Q8TD55 490 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 UROC1Q96N76 676 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 CGRRF1Q99675 332 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 PBX4Q9BYU1 374 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 NRDE2Q9H7Z3 1164 aa18.47■□□□□ 0.55
RPRD1A-209ENST00000590898 NLRC5Q86WI3 1866 aa18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 GTF2H1P32780 548 aa18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 RPL9P32969 192 aaKnown RBP18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 SPAG1Q07617 926 aa18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 CCDC40Q4G0X9 1142 aa18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 TRIM5Q9C035 493 aa18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 SAMSN1Q9NSI8 373 aaKnown RBP18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 RWDD3Q9Y3V2 267 aa18.46■□□□□ 0.55
RPRD1A-209ENST00000590898 STX10O60499 249 aa18.45■□□□□ 0.54
RPRD1A-209ENST00000590898 NFICP08651 508 aa18.45■□□□□ 0.54
RPRD1A-209ENST00000590898 TRIM59Q8IWR1 403 aa18.45■□□□□ 0.54
RPRD1A-209ENST00000590898 ANKRD36BP1Q96IX9 119 aa18.45■□□□□ 0.54
RPRD1A-209ENST00000590898 AAASQ9NRG9 546 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms