RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SLC11A1P49279 550 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 PAK1Q13153 545 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 NAB2Q15742 525 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 DPCR1Q3MIW9 517 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 ZNF697Q5TEC3 545 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 CEP135Q66GS9 1140 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 JADE1Q6IE81 842 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 ARNTL2Q8WYA1 636 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 PLVAPQ9BX97 442 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 DACH1Q9UI36 760 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 DERAQ9Y315 318 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 MYO9BQ13459 2157 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 CHD9Q3L8U1 2897 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 CETN3O15182 167 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 RB1P06400 928 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 GALTP07902 379 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 PBX3P40426 434 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 OR1G1P47890 313 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 CASP4P49662 377 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 STX17P56962 302 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 FKBP3Q00688 224 aaKnown RBP20.77■□□□□ 0.92
DDX39A-214ENST00000590556 CYP24A1Q07973 514 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 TMEM132DQ14C87 1099 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 SURF1Q15526 300 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 GPR153Q6NV75 609 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 FBXO22Q8NEZ5 403 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 C18orf25Q96B23 403 aaPredicted RBP20.77■□□□□ 0.92
DDX39A-214ENST00000590556 TTYH1Q9H313 450 aaPredicted RBP20.77■□□□□ 0.92
DDX39A-214ENST00000590556 PDE11AQ9HCR9 933 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 FAN1Q9Y2M0 1017 aa20.77■□□□□ 0.92
DDX39A-214ENST00000590556 CASTOR2A6NHX0 329 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 NT5C1B-RDH14C9J2C7 533 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 C5orf67F2Z3F1 127 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 XPOTO43592 962 aaKnown RBP20.76■□□□□ 0.91
DDX39A-214ENST00000590556 LETM1O95202 739 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-214ENST00000590556 NFICP08651 508 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 PPM1AP35813 382 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 FXR1P51114 621 aaKnown RBP eCLIP20.76■□□□□ 0.91
DDX39A-214ENST00000590556 ZBTB6Q15916 424 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 TTI2Q6NXR4 508 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 MFSD14AQ96MC6 490 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 SPG21Q9NZD8 308 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 RWDD2AQ9UIY3 292 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 UBQLN1Q9UMX0 589 aaKnown RBP20.76■□□□□ 0.91
DDX39A-214ENST00000590556 PRG3Q9Y2Y8 225 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-214ENST00000590556 C2CD2Q9Y426 696 aa20.76■□□□□ 0.91
DDX39A-214ENST00000590556 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-214ENST00000590556 NRP1O14786 923 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 AKAP3O75969 853 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 PSMC2P35998 433 aaKnown RBP20.75■□□□□ 0.91
DDX39A-214ENST00000590556 WNT7BP56706 349 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 SOX4Q06945 474 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-214ENST00000590556 PSMD6Q15008 389 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 STX1AQ16623 288 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 FOXR2Q6PJQ5 311 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 NT5DC4Q86YG4 428 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 ZC3H3Q8IXZ2 948 aaKnown RBP20.75■□□□□ 0.91
DDX39A-214ENST00000590556 SLC39A11Q8N1S5 342 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 KLHL23Q8NBE8 558 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 BEST2Q8NFU1 509 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 RABGGTAQ92696 567 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 CCDC127Q96BQ5 260 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 EEF2KMTQ96G04 330 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 UROC1Q96N76 676 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 DUSP9Q99956 384 aaKnown RBP20.75■□□□□ 0.91
DDX39A-214ENST00000590556 C11orf84Q9BUA3 381 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-214ENST00000590556 COLEC11Q9BWP8 271 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 ANO10Q9NW15 660 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 CACNG4Q9UBN1 327 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 TUBGCP4Q9UGJ1 667 aa20.75■□□□□ 0.91
DDX39A-214ENST00000590556 MAPK13O15264 365 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 CYP3A5P20815 502 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 TFAMQ00059 246 aaKnown RBP20.74■□□□□ 0.91
DDX39A-214ENST00000590556 GPM6BQ13491 265 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 CT47A1Q5JQC4 288 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-214ENST00000590556 SPATA1Q5VX52 437 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 EFCAB13Q8IY85 973 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 FAM186BQ8IYM0 893 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 CSGALNACT2Q8N6G5 542 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 CACTINQ8WUQ7 758 aaKnown RBP20.74■□□□□ 0.91
DDX39A-214ENST00000590556 DDX27Q96GQ7 796 aaKnown RBP20.74■□□□□ 0.91
DDX39A-214ENST00000590556 FNBP1Q96RU3 617 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 PAAF1Q9BRP4 392 aa20.74■□□□□ 0.91
DDX39A-214ENST00000590556 EPOPA6NHQ4 379 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 H3BNC9 293 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 FGF18O76093 207 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 DLATP10515 647 aaKnown RBP20.73■□□□□ 0.91
DDX39A-214ENST00000590556 EPB41P11171 864 aaKnown RBP20.73■□□□□ 0.91
DDX39A-214ENST00000590556 ERCC5P28715 1186 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-214ENST00000590556 RPL9P32969 192 aaKnown RBP20.73■□□□□ 0.91
DDX39A-214ENST00000590556 GUCY2FP51841 1108 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 KRT17Q04695 432 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 TYRO3Q06418 890 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 GRIN2CQ14957 1233 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 TMEM169Q96HH4 297 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 IGSF21Q96ID5 467 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 CEP63Q96MT8 703 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 FAM161BQ96MY7 647 aa20.73■□□□□ 0.91
DDX39A-214ENST00000590556 MKNK1Q9BUB5 465 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms