RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 TSPAN15O95858 294 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 CHRNA1P02708 482 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 MMP1P03956 469 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 CENPBP07199 599 aaPredicted RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 SRGAP2BP0DMP2 458 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 ZSCAN22P10073 491 aaPredicted RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 GHRP10912 638 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 SMARCA1P28370 1054 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 TCF7P36402 384 aaPredicted RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 LTBRP36941 435 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 GRIA4P48058 902 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 RRP1P56182 461 aaKnown RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 ADAM17P78536 824 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 MRPS9P82933 396 aaKnown RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 SP4Q02446 784 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 PPFIA1Q13136 1202 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 ADAM15Q13444 863 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 GRM4Q14833 912 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 SEC23AQ15436 765 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 CLUL1Q15846 466 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 KCNMB1Q16558 191 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 SPOUT1Q5T280 376 aaKnown RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 SLC23A3Q6PIS1 610 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 TSHZ1Q6ZSZ6 1077 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 CMTR2Q8IYT2 770 aaKnown RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 TMTC2Q8N394 836 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 NME8Q8N427 588 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 NCOA7Q8NI08 942 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 IL31RAQ8NI17 732 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 CTCFLQ8NI51 663 aaPredicted RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 LMBR1Q8WVP7 490 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 GPRASP2Q96D09 838 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 HRASLS5Q96KN8 279 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 MAP3K14Q99558 947 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 BACH2Q9BYV9 841 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 AZI2Q9H6S1 392 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 ZFYVE1Q9HBF4 777 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 ALG13Q9NP73 1137 aaKnown RBP6.35□□□□□ -1.39
DNMT1-220ENST00000589351 PRDM7Q9NQW5 492 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 TUBE1Q9UJT0 475 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 PCDHB12Q9Y5F1 795 aa6.35□□□□□ -1.39
DNMT1-220ENST00000589351 COL4A6Q14031 1691 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.34□□□□□ -1.39
DNMT1-220ENST00000589351 PPP1R11O60927 126 aaPredicted RBP6.34□□□□□ -1.39
DNMT1-220ENST00000589351 DGKIO75912 1065 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 MPSTP25325 297 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 OXCT1P55809 520 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 IGBP1P78318 339 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 MRPS6P82932 125 aaKnown RBP6.34□□□□□ -1.39
DNMT1-220ENST00000589351 NUCB1Q02818 461 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 UBE3AQ05086 875 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 LPIN1Q14693 890 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 TCEAL1Q15170 157 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 ECM1Q16610 540 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 FBXO47Q5MNV8 452 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 CASC1Q6TDU7 716 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 CYB5R4Q7L1T6 521 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 CCNJLQ8IV13 435 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 SMC5Q8IY18 1101 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 DNAJB3Q8WWF6 145 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 PIBF1Q8WXW3 757 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 ZNF689Q96CS4 500 aaPredicted RBP6.34□□□□□ -1.39
DNMT1-220ENST00000589351 LIN37Q96GY3 246 aaPredicted RBP6.34□□□□□ -1.39
DNMT1-220ENST00000589351 TLE6Q9H808 572 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 PSTPIP2Q9H939 334 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 PUF60Q9UHX1 559 aaKnown RBP6.34□□□□□ -1.39
DNMT1-220ENST00000589351 MUTYHQ9UIF7 546 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 PCDHB7Q9Y5E2 793 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 CDY2AQ9Y6F7 541 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 NLRC5Q86WI3 1866 aa6.34□□□□□ -1.39
DNMT1-220ENST00000589351 TMEM221A6NGB7 291 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CCDC69A6NI79 296 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 M0R296 226 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 LEFTY1O75610 366 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 EYA4O95677 639 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CEACAM5P06731 702 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CALM1P0DP23 149 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CALM2P0DP24 149 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CALM3P0DP25 149 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 SCG2P13521 617 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 MARK3P27448 753 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 CD52P31358 61 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 NRIP1P48552 1158 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 ANAPC15P60006 121 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 DLX2Q07687 328 aaPredicted RBP6.33□□□□□ -1.4
DNMT1-220ENST00000589351 TROAPQ12815 778 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 COASYQ13057 564 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 PAK2Q13177 524 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 MTMR1Q13613 665 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 MRPL58Q14197 206 aaKnown RBP6.33□□□□□ -1.4
DNMT1-220ENST00000589351 BMS1Q14692 1282 aaKnown RBP6.33□□□□□ -1.4
DNMT1-220ENST00000589351 USP17L6PQ6QN14 398 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 SYNE3Q6ZMZ3 975 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 TTLL10Q6ZVT0 673 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 APBB1IPQ7Z5R6 666 aaPredicted RBP6.33□□□□□ -1.4
DNMT1-220ENST00000589351 EFHBQ8N7U6 833 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 SPPL3Q8TCT6 385 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 POF1BQ8WVV4 589 aa6.33□□□□□ -1.4
DNMT1-220ENST00000589351 NEK1Q96PY6 1258 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms