RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 DDX27Q96GQ7 796 aaKnown RBP15.05■□□□□ -0
HDAC5-208ENST00000588419 PPP1R10Q96QC0 940 aaKnown RBP15.05■□□□□ -0
HDAC5-208ENST00000588419 TCHPQ9BT92 498 aa15.05■□□□□ -0
HDAC5-208ENST00000588419 CDT1Q9H211 546 aa15.05■□□□□ -0
HDAC5-208ENST00000588419 KMT5AQ9NQR1 393 aa15.05■□□□□ -0
HDAC5-208ENST00000588419 MTRRQ9UBK8 725 aa15.05■□□□□ -0
HDAC5-208ENST00000588419 R4GN57 208 aa15.05■□□□□ -0
HDAC5-208ENST00000588419 TCHHQ07283 1943 aa15.05■□□□□ -0
HDAC5-208ENST00000588419 TICRRQ7Z2Z1 1910 aa15.05■□□□□ -0
HDAC5-208ENST00000588419 ANHXE9PGG2 379 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 FGFR3P22607 806 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 CDC25AP30304 524 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 NPTX2P47972 431 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 TRAPPC10P48553 1259 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 GPC5P78333 572 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 RAD51AP2Q09MP3 1159 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 PABPC1LQ4VXU2 614 aaKnown RBP15.04■□□□□ -0
HDAC5-208ENST00000588419 KRT79Q5XKE5 535 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 MCTP1Q6DN14 999 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 MTSS1LQ765P7 747 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 C3orf58Q8NDZ4 430 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 ZSCAN31Q96LW9 406 aaPredicted RBP15.04■□□□□ -0
HDAC5-208ENST00000588419 UROC1Q96N76 676 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 HINFPQ9BQA5 517 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 RUSC1Q9BVN2 902 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 TARS2Q9BW92 718 aaKnown RBP15.04■□□□□ -0
HDAC5-208ENST00000588419 MRPL4Q9BYD3 311 aaKnown RBP15.04■□□□□ -0
HDAC5-208ENST00000588419 SH2B1Q9NRF2 756 aaPredicted RBP15.04■□□□□ -0
HDAC5-208ENST00000588419 TOPORSQ9NS56 1045 aaPredicted RBP15.04■□□□□ -0
HDAC5-208ENST00000588419 ANKFY1Q9P2R3 1169 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 DNM3Q9UQ16 869 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 TNFSF13BQ9Y275 285 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 SIT1Q9Y3P8 196 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 FAM186AA6NE01 2351 aa15.04■□□□□ -0
HDAC5-208ENST00000588419 CFAP54Q96N23 3096 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 SMIM28A0A1B0GU29 152 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 TMEM189-UBE2V1I3L0A0 370 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 PODXLO00592 558 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 SLC16A4O15374 487 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 TRAPPC3O43617 180 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 LRRN2O75325 713 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 LRG1P02750 347 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 HOXA9P31269 272 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 GRM5P41594 1212 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 MATR3P43243 847 aaKnown RBP eCLIP15.03■□□□□ -0
HDAC5-208ENST00000588419 SOX4Q06945 474 aaPredicted RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 SNW1Q13573 536 aaKnown RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 RAB33AQ14088 237 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 UPP1Q16831 310 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 RSPO2Q6UXX9 243 aaPredicted RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 ANKS3Q6ZW76 656 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 C4orf32Q8N8J7 132 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 DRC1Q96MC2 740 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 PLIN2Q99541 437 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 ACO2Q99798 780 aaKnown RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 SLC2A4RGQ9NR83 387 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 DNMT3BQ9UBC3 853 aaKnown RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 MRPS23Q9Y3D9 190 aaKnown RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 NUB1Q9Y5A7 615 aa15.03■□□□□ -0
HDAC5-208ENST00000588419 ZFP37Q9Y6Q3 630 aaPredicted RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 PTPRZ1P23471 2315 aaPredicted RBP15.03■□□□□ -0
HDAC5-208ENST00000588419 SFI1A8K8P3 1242 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 PRRG1O14668 218 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 PAPLNO95428 1278 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 ELF1P32519 619 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 TOB1P50616 345 aaPredicted RBP15.02■□□□□ -0
HDAC5-208ENST00000588419 UBXN2BQ14CS0 331 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 SEZ6Q53EL9 994 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 NPAS3Q8IXF0 933 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 IGSF22Q8N9C0 903 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 PJA1Q8NG27 643 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 MCRS1Q96EZ8 462 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 SNX27Q96L92 541 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 SLC38A7Q9NVC3 462 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 STK24Q9Y6E0 443 aa15.02■□□□□ -0
HDAC5-208ENST00000588419 CACNA1IQ9P0X4 2223 aa15.02□□□□□ -0.01
HDAC5-208ENST00000588419 MCM4P33991 863 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 ROR1Q01973 937 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 STRN3Q13033 797 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 MLF2Q15773 248 aaPredicted RBP15.01□□□□□ -0.01
HDAC5-208ENST00000588419 VARS2Q5ST30 1063 aaKnown RBP15.01□□□□□ -0.01
HDAC5-208ENST00000588419 PHLDB3Q6NSJ2 640 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 RINT1Q6NUQ1 792 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 MPZL3Q6UWV2 235 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 CD300LGQ6UXG3 332 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 DTHD1Q6ZMT9 781 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 TAS1R3Q7RTX0 852 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 KCNK18Q7Z418 384 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 DAW1Q8N136 415 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 C18orf25Q96B23 403 aaPredicted RBP15.01□□□□□ -0.01
HDAC5-208ENST00000588419 SHDQ96IW2 340 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 ZMAT2Q96NC0 199 aaKnown RBP15.01□□□□□ -0.01
HDAC5-208ENST00000588419 ACAP3Q96P50 834 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 CYP4F11Q9HBI6 524 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 DMDP11532 3685 aa15.01□□□□□ -0.01
HDAC5-208ENST00000588419 VPS13AQ96RL7 3174 aa15□□□□□ -0.01
HDAC5-208ENST00000588419 WDR27A2RRH5 827 aa15□□□□□ -0.01
HDAC5-208ENST00000588419 RHOP08100 348 aa15□□□□□ -0.01
HDAC5-208ENST00000588419 MCF2P10911 925 aa15□□□□□ -0.01
HDAC5-208ENST00000588419 CEBPBP17676 345 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms