RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MXD4Q14582 209 aaPredicted RBP6.54□□□□□ -1.36
SMG6-219ENST00000575663 EMC2Q15006 297 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 PFKFB3Q16875 520 aaPredicted RBP6.54□□□□□ -1.36
SMG6-219ENST00000575663 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 TCEAL6Q6IPX3 200 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 KIAA1211LQ6NV74 962 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 SLC27A1Q6PCB7 646 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 APOA5Q6Q788 366 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 ANKS3Q6ZW76 656 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 ANO5Q75V66 913 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 RALGPS2Q86X27 583 aaPredicted RBP6.54□□□□□ -1.36
SMG6-219ENST00000575663 MFSD6LQ8IWD5 586 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 SMC5Q8IY18 1101 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 LEMD2Q8NC56 503 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 CCDC148Q8NFR7 591 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 RABGGTAQ92696 567 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 SLC5A5Q92911 643 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 TCEAL3Q969E4 200 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 TMEM143Q96AN5 459 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 CPB2Q96IY4 423 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 ZC3H10Q96K80 434 aaKnown RBP6.54□□□□□ -1.36
SMG6-219ENST00000575663 SLC32A1Q9H598 525 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 DHX33Q9H6R0 707 aaKnown RBP6.54□□□□□ -1.36
SMG6-219ENST00000575663 TRPV4Q9HBA0 871 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 TMEM9BQ9NQ34 198 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 SLC8A2Q9UPR5 921 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 MSRB2Q9Y3D2 182 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 RBM8AQ9Y5S9 174 aaKnown RBP6.54□□□□□ -1.36
SMG6-219ENST00000575663 EVPLQ92817 2033 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 ZZEF1O43149 2961 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 LNP1A1A4G5 178 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 ARHGEF37A1IGU5 675 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 MYBPHLA2RUH7 354 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 HEPACAM2A8MVW5 462 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 SPECC1L-ADORA2AF8WAN1 911 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 H0Y626 953 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 ARNTLO00327 626 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 CHADO15335 359 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 SGSM2O43147 1006 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 TRAPPC3O43617 180 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 HYAL3O43820 417 aaPredicted RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 ATG13O75143 517 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 PSMD10O75832 226 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 STBD1O95210 358 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 TRIM16O95361 564 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 SEC24BO95487 1268 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 NPTXRO95502 500 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 TOP3BO95985 862 aaKnown RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 THP07101 528 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 ARF4P18085 180 aaPredicted RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 CTHP32929 405 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 QARSP47897 775 aaKnown RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 USP11P51784 963 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 FGD1P98174 961 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 NUCB1Q02818 461 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 CREB5Q02930 508 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 CCINQ13939 588 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 PLK5Q496M5 336 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 Q4G0T1 1027 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 PDZD3Q86UT5 571 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 FERMT3Q86UX7 667 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 C11orf74Q86VG3 221 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 PROSER1Q86XN7 944 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 CAMKK1Q8N5S9 505 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 GSTCDQ8NEC7 633 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 ZSCAN18Q8TBC5 510 aaPredicted RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 TCEAL4Q96EI5 215 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 MTRQ99707 1265 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 PAAF1Q9BRP4 392 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 LRRC2Q9BYS8 371 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 C22orf23Q9BZE7 217 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 GPR88Q9GZN0 384 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 RWDD1Q9H446 243 aaPredicted RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 CYP4F11Q9HBI6 524 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 ASAH2Q9NR71 780 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 BMP2KQ9NSY1 1161 aaPredicted RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 KLK14Q9P0G3 267 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 CACNG4Q9UBN1 327 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 BACE2Q9Y5Z0 518 aa6.53□□□□□ -1.36
SMG6-219ENST00000575663 FASNP49327 2511 aaKnown RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 ANKRD11Q6UB99 2663 aaPredicted RBP6.53□□□□□ -1.36
SMG6-219ENST00000575663 LAMA5O15230 3695 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 CCDC196A0A1B0GTZ2 297 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 TMEM189-UBE2V1I3L0A0 370 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 DPYSL4O14531 572 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 KHNYNO15037 678 aaKnown RBP6.52□□□□□ -1.37
SMG6-219ENST00000575663 EXTL3O43909 919 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 B3GAT3O94766 335 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 PRKCBP05771 671 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 FGFR3P22607 806 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 CHMLP26374 656 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 GBP1P32455 592 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 VIPR2P41587 438 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 SOX9P48436 509 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 PXNP49023 591 aaPredicted RBP6.52□□□□□ -1.37
SMG6-219ENST00000575663 RCAN1P53805 252 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 NPEPPSP55786 919 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 PTENP60484 403 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 PLCB2Q00722 1185 aa6.52□□□□□ -1.37
SMG6-219ENST00000575663 ROR1Q01973 937 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms