RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ASB1Q9Y576 335 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 ECM29Q5VYK3 1845 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 GOLGA6L22H0YM25 854 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 PAPLNO95428 1278 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 TMEM253P0C7T8 217 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 CYP2C8P10632 490 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 ITGB5P18084 799 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 HOXD10P28358 340 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 FLT3LGP49771 235 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 RAB27AP51159 221 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 CACNB3P54284 484 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 KRT85P78386 507 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 PDCD1Q15116 288 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 ABCB5Q2M3G0 1257 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 STRIP1Q5VSL9 837 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 TEPPQ6URK8 271 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 ZBTB46Q86UZ6 589 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-214ENST00000572365 CPA5Q8WXQ8 436 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 ALG3Q92685 438 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 GBP4Q96PP9 640 aa6.65□□□□□ -1.34
SF3B3-214ENST00000572365 NGRNQ9NPE2 291 aaKnown RBP6.65□□□□□ -1.34
SF3B3-214ENST00000572365 COL3A1P02461 1466 aaPredicted RBP6.65□□□□□ -1.35
SF3B3-214ENST00000572365 XIRP2A4UGR9 3374 aa6.65□□□□□ -1.35
SF3B3-214ENST00000572365 DDX60LQ5H9U9 1706 aaKnown RBP6.64□□□□□ -1.35
SF3B3-214ENST00000572365 E2F8A0AVK6 867 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 LCHNA4D1U4 455 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 TRIM75PA6NK02 468 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-214ENST00000572365 PDHXO00330 501 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 AKAP10O43572 662 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 KDM1AO60341 852 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 PIN1Q13526 163 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-214ENST00000572365 PTPN21Q16825 1174 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 CR1LQ2VPA4 569 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 HSP90AB3PQ58FF7 597 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 CD276Q5ZPR3 534 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 MIGA2Q7L4E1 593 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 TMC6Q7Z403 805 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 PROSER1Q86XN7 944 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 CILP2Q8IUL8 1156 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 ANKRD18AQ8IVF6 992 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 FMNL3Q8IVF7 1028 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 CMIPQ8IY22 773 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 C1orf162Q8NEQ5 155 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-214ENST00000572365 E2F7Q96AV8 911 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 HOOK2Q96ED9 719 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 FUBP3Q96I24 572 aaKnown RBP eCLIP6.64□□□□□ -1.35
SF3B3-214ENST00000572365 ISCA1Q9BUE6 129 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 TTYH1Q9H313 450 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-214ENST00000572365 BCAS3Q9H6U6 928 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 TSPYL4Q9UJ04 414 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 MSRAQ9UJ68 235 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 PLA2G2DQ9UNK4 145 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 XDHP47989 1333 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 MUC6Q6W4X9 2439 aa6.64□□□□□ -1.35
SF3B3-214ENST00000572365 WDHD1O75717 1129 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-214ENST00000572365 CFBP00751 764 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 ASGR2P07307 311 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 MYBL2P10244 700 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 RBP3P10745 1247 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 CETPP11597 493 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 FOSL2P15408 326 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 VIPR1P32241 457 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 THBS2P35442 1172 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 GPR3P46089 330 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 CCT4P50991 539 aaKnown RBP6.63□□□□□ -1.35
SF3B3-214ENST00000572365 SCAND1P57086 179 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 ZNF200P98182 395 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-214ENST00000572365 CCDC181Q5TID7 509 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 PHYKPLQ8IUZ5 450 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 C7orf31Q8N865 590 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 ACAP3Q96P50 834 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 RNF38Q9H0F5 515 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 CDH19Q9H159 772 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 AASDHPPTQ9NRN7 309 aa6.63□□□□□ -1.35
SF3B3-214ENST00000572365 ZNF70Q9UC06 446 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-214ENST00000572365 LAS1LQ9Y4W2 734 aaKnown RBP6.63□□□□□ -1.35
SF3B3-214ENST00000572365 UBA6A0AVT1 1052 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-214ENST00000572365 ZNF503-AS2A6NEH8 195 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 GOLGA8AA7E2F4 631 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 GOLGA8BA8MQT2 603 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 TSPAN6O43657 245 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 TAF5LO75529 589 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 ABLIM3O94929 683 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 MPIG6BO95866 241 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 STAT5AP42229 794 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 PRMT2P55345 433 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 NKX3-2P78367 333 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 PPP2R5AQ15172 486 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 SHHQ15465 462 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 LRRC26Q2I0M4 334 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 TTC38Q5R3I4 469 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 C9orf50Q5SZB4 431 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 ZC3H18Q86VM9 953 aaKnown RBP6.62□□□□□ -1.35
SF3B3-214ENST00000572365 CXorf67Q86X51 503 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-214ENST00000572365 KRTAP1-3Q8IUG1 177 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 HIPK4Q8NE63 616 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 FAXDC2Q96IV6 333 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 TEPSINQ96N21 525 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms