RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CNOT6Q9ULM6 557 aaKnown RBP4.89□□□□□ -1.63
HMGB3P26-201ENST00000560051 CHTOPQ9Y3Y2 248 aaKnown RBP4.89□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC4A4Q9Y6R1 1079 aa4.89□□□□□ -1.63
HMGB3P26-201ENST00000560051 V9GYY5 206 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P26-201ENST00000560051 PEG3Q9GZU2 1588 aa4.89□□□□□ -1.63
HMGB3P26-201ENST00000560051 CARMIL1Q5VZK9 1371 aa4.89□□□□□ -1.63
HMGB3P26-201ENST00000560051 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB3P26-201ENST00000560051 A0A087X0M5 115 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 A0A1B0GX30 115 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CTAGE9A4FU28 777 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 GOLGA6L4A6NEF3 574 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 GOLGA6L10A6NI86 522 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 EYA2O00167 538 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 PSMD9O00233 223 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ELL2O00472 640 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 POLR2DO15514 142 aaKnown RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 FOXD2O60548 495 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 GOSR1O95249 250 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 TRIM16O95361 564 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ASGR2P07307 311 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZFYP08048 801 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 C6orf222P0C671 652 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 AKR1B1P15121 316 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CSF2RAP15509 400 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ALOX12P18054 663 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 KCNA5P22460 613 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CTNNA2P26232 953 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 KPNA1P52294 538 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 USP14P54578 494 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC12A2P55011 1212 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 MRPS15P82914 257 aaKnown RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 PPIDQ08752 370 aaKnown RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 GPS2Q13227 327 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CAMK2GQ13555 558 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 IDI1Q13907 227 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 FRG1Q14331 258 aaKnown RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 DHCR24Q15392 516 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 TAF12Q16514 161 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 MEA1Q16626 185 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 LRRFIP1Q32MZ4 808 aaKnown RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC45A4Q5BKX6 768 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SNAP47Q5SQN1 464 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 TPGS2Q68CL5 300 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC6A19Q695T7 634 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 LIN54Q6MZP7 749 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 PKN3Q6P5Z2 889 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC23A3Q6PIS1 610 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ATF7IPQ6VMQ6 1270 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SRGAP1Q7Z6B7 1085 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 MRPL10Q7Z7H8 261 aaKnown RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SESTD1Q86VW0 696 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZSWIM9Q86XI8 627 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 VPS52Q8N1B4 723 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ESX1Q8N693 406 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 TMCO5AQ8N6Q1 288 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SMYD1Q8NB12 490 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 C3orf58Q8NDZ4 430 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 IPMKQ8NFU5 416 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CASP10Q92851 521 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 EXOC2Q96KP1 924 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ATP6V1G3Q96LB4 118 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SGCZQ96LD1 299 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 UBXN10Q96LJ8 280 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CCDC138Q96M89 665 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CATSPER2Q96P56 530 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 FERD3LQ96RJ6 166 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CITED2Q99967 270 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SDF4Q9BRK5 362 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZPBPQ9BS86 351 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 MENTQ9BUN1 341 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 KIFC3Q9BVG8 833 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 EHD4Q9H223 541 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 EHMT1Q9H9B1 1298 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 RSAD1Q9HA92 442 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 UBN1Q9NPG3 1134 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 WASH6PQ9NQA3 447 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 RRAGDQ9NQL2 400 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 PLSCR4Q9NRQ2 329 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 MBD2Q9UBB5 411 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ORC3Q9UBD5 711 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 SUCOQ9UBS9 1254 aaKnown RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 DSEQ9UL01 958 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ZMYND8Q9ULU4 1186 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CLEC4AQ9UMR7 237 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 EDARQ9UNE0 448 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 CNPY2Q9Y2B0 182 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 MED16Q9Y2X0 877 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 AP1M2Q9Y6Q5 423 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 TTC21BQ7Z4L5 1316 aa4.88□□□□□ -1.63
HMGB3P26-201ENST00000560051 ABCC9O60706 1549 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 LRRIQ4A6NIV6 560 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 LRRC72A6NJI9 287 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 TTC34A8MYJ7 566 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 TMEM232C9JQI7 657 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 DDX39AO00148 427 aaKnown RBP4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 PDLIM1O00151 329 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 PSMA7O14818 248 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 PLSCR1O15162 318 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 SOCS5O75159 536 aa4.87□□□□□ -1.63
HMGB3P26-201ENST00000560051 SLC22A3O75751 556 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms