RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 TMEM105Q8N8V8 129 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-203ENST00000554074 RABGGTAQ92696 567 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 TMX3Q96JJ7 454 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 AK8Q96MA6 479 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 RUSC1Q9BVN2 902 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 CDT1Q9H211 546 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 CXCL16Q9H2A7 254 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 MFSD1Q9H3U5 465 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 SMOC2Q9H3U7 446 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 PIDD1Q9HB75 910 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 KMT5AQ9NQR1 393 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 MTRRQ9UBK8 725 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 CACNG4Q9UBN1 327 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 WNT16Q9UBV4 365 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 GDAQ9Y2T3 454 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 BACE2Q9Y5Z0 518 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 ZNF638Q14966 1978 aaKnown RBP7.25□□□□□ -1.25
SLIRP-203ENST00000554074 TSC2P49815 1807 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 NUP210Q8TEM1 1887 aaPredicted RBP7.24□□□□□ -1.25
SLIRP-203ENST00000554074 VPS13AQ96RL7 3174 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 PROB1E7EW31 1015 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 H3BQV1 296 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SYN3O14994 580 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 XYLBO75191 536 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 TOM1L1O75674 476 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 B3GAT3O94766 335 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 BMP15O95972 392 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 C8AP07357 584 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SPATA31D3P0C874 917 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SRFP11831 508 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 PLS3P13797 630 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 RPL17P18621 184 aaKnown RBP7.24□□□□□ -1.25
SLIRP-203ENST00000554074 LIG1P18858 919 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 AOC1P19801 751 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 GJB2P29033 226 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 CDC25AP30304 524 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 RPL9P32969 192 aaKnown RBP7.24□□□□□ -1.25
SLIRP-203ENST00000554074 CLCNKBP51801 687 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SMTNP53814 917 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SLC12A3P55017 1021 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 STRN3Q13033 797 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 ZNF568Q3ZCX4 644 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 TMEM119Q4V9L6 283 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 PPM1LQ5SGD2 360 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 CWF19L1Q69YN2 538 aaKnown RBP7.24□□□□□ -1.25
SLIRP-203ENST00000554074 MPZL3Q6UWV2 235 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 CD300LGQ6UXG3 332 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 ZPBP2Q6X784 338 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SPATA31D4Q6ZUB0 917 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 ANKS3Q6ZW76 656 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 CEP57Q86XR8 500 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SLC44A3Q8N4M1 653 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 CEP120Q8N960 986 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 TMEM161BQ8NDZ6 487 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 HASPINQ8TF76 798 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 SNX27Q96L92 541 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 ACAP3Q96P50 834 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 PNMA5Q96PV4 448 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 MYADMQ96S97 322 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 TSPAN18Q96SJ8 248 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 RTP3Q9BQQ7 232 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 TARS2Q9BW92 718 aaKnown RBP7.24□□□□□ -1.25
SLIRP-203ENST00000554074 POLD4Q9HCU8 107 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 CNTN3Q9P232 1028 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 KCNH3Q9ULD8 1083 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 ODF2LQ9ULJ1 636 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 USP20Q9Y2K6 914 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.24□□□□□ -1.25
SLIRP-203ENST00000554074 F5P12259 2224 aa7.24□□□□□ -1.25
SLIRP-203ENST00000554074 ZFHX2Q9C0A1 2572 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 ARHGEF37A1IGU5 675 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 VWA3AA6NCI4 1184 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 SLC16A4O15374 487 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 ADAM12O43184 909 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 CD2BP2O95400 341 aaKnown RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 PLA2G4BP0C869 781 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 MAPTP10636 758 aaKnown RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 NPR3P17342 541 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 FSHRP23945 695 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 ABCD1P33897 745 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 OR1D2P34982 312 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 NBL1P41271 181 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 NCKAP1LP55160 1127 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 SOX4Q06945 474 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 HTR4Q13639 388 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 NOLC1Q14978 699 aaKnown RBP eCLIP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 KYAT1Q16773 422 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 GLRA4Q5JXX5 417 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 AXDND1Q5T1B0 1012 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 SLC8B1Q6J4K2 584 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 PHLDB3Q6NSJ2 640 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 MTSS1LQ765P7 747 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 GET4Q7L5D6 327 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-203ENST00000554074 BRAPQ7Z569 592 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 C3orf58Q8NDZ4 430 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 ZNF461Q8TAF7 563 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 CDK5RAP3Q96JB5 506 aa7.23□□□□□ -1.25
SLIRP-203ENST00000554074 ZMAT2Q96NC0 199 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms