RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 C11orf54Q9H0W9 315 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-210ENST00000553455 MEGF9Q9H1U4 602 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 MRPL46Q9H2W6 279 aaKnown RBP6.47□□□□□ -1.37
SYNE2-210ENST00000553455 RSAD1Q9HA92 442 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 RTEL1Q9NZ71 1219 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 TAGLN3Q9UI15 199 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 PCDHA1Q9Y5I3 950 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 A0A1W2PRX2 142 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 MYO1FO00160 1098 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 GRM6O15303 877 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 MGEA5O60502 916 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 TRIM13O60858 407 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 RAP2AP10114 183 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 SMARCA1P28370 1054 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 EPHB4P54760 987 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 AK2P54819 239 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 ANKS6Q68DC2 871 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 LGI4Q8N135 537 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 SYT8Q8NBV8 401 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 BORCS6Q96GS4 357 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 APIPQ96GX9 242 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 PSMD1Q99460 953 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 TCF25Q9BQ70 676 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 MRI1Q9BV20 369 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 BTBD1Q9H0C5 482 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 NUP62CLQ9H1M0 184 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 C12orf65Q9H3J6 166 aaKnown RBP6.46□□□□□ -1.38
SYNE2-210ENST00000553455 SEC61A2Q9H9S3 476 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 MSL2Q9HCI7 577 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 FNIP2Q9P278 1114 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 PCDHA6Q9UN73 950 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 USP19O94966 1318 aa6.46□□□□□ -1.38
SYNE2-210ENST00000553455 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 A0A1W2PPL8 197 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 HOXA3O43365 443 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-210ENST00000553455 MATN4O95460 622 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 AHSGP02765 367 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 C8AP07357 584 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 KITP10721 976 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 CR2P20023 1033 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 SLC6A4P31645 630 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 PIK3CBP42338 1070 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 PPP2CBP62714 309 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 PPP2CAP67775 309 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 MORC3Q14149 939 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 VPS72Q15906 364 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 PABPC1LQ4VXU2 614 aaKnown RBP6.45□□□□□ -1.38
SYNE2-210ENST00000553455 ARHGEF18Q6ZSZ5 1173 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 TOGARAM2Q6ZUX3 1019 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 BRIX1Q8TDN6 353 aaKnown RBP6.45□□□□□ -1.38
SYNE2-210ENST00000553455 MORC4Q8TE76 937 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 LRRC37BQ96QE4 947 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 LMF1Q96S06 567 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 TBCBQ99426 244 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 NDC1Q9BTX1 674 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 LRRC27Q9C0I9 530 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 SIDT1Q9NXL6 827 aaKnown RBP6.45□□□□□ -1.38
SYNE2-210ENST00000553455 CPA4Q9UI42 421 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 TPCN1Q9ULQ1 816 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 PNPLA7Q6ZV29 1317 aa6.45□□□□□ -1.38
SYNE2-210ENST00000553455 PLEKHD1A6NEE1 506 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 PRSS29PA6NIE9 313 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 PJA2O43164 708 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 CDC14BO60729 498 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 ATP5JP18859 108 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 CFPP27918 469 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 PIK3CGP48736 1102 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 PRIM2P49643 509 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 PTH1RQ03431 593 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 OS9Q13438 667 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-210ENST00000553455 CSRP2Q16527 193 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 EMC10Q5UCC4 262 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 XRRA1Q6P2D8 792 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 SRLQ86TD4 932 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 SP8Q8IXZ3 490 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 IL17RDQ8NFM7 739 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 PHKBQ93100 1093 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 LSM14BQ9BX40 385 aaKnown RBP6.44□□□□□ -1.38
SYNE2-210ENST00000553455 PLA2G12BQ9BX93 195 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 DUSP10Q9Y6W6 482 aa6.44□□□□□ -1.38
SYNE2-210ENST00000553455 TCRBV7S2A1N4TA0A589 114 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 B5MCH6 92 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 TBX3O15119 743 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 SNRPA1P09661 255 aaKnown RBP6.43□□□□□ -1.38
SYNE2-210ENST00000553455 HDCP19113 662 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 SLC7A1P30825 629 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 CASP5P51878 434 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 ARFIP2P53365 341 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 CCDC93Q567U6 631 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 KHDC1LQ5JSQ8 128 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 ZNF529Q6P280 563 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 FAM111BQ6SJ93 734 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 DOK3Q7L591 496 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 GPRIN1Q7Z2K8 1008 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 XYLT1Q86Y38 959 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 LRRC56Q8IYG6 542 aaPredicted RBP6.43□□□□□ -1.38
SYNE2-210ENST00000553455 EXOC8Q8IYI6 725 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 ARL8AQ96BM9 186 aa6.43□□□□□ -1.38
SYNE2-210ENST00000553455 PGBD4Q96DM1 585 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms