RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CLUHO75153 1309 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 LRRIQ4A6NIV6 560 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 PTGESO14684 152 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 MED24O75448 989 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 KIF4AO95239 1232 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 EFEMP2O95967 443 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 AOC1P19801 751 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 SOX11P35716 441 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 NBL1P41271 181 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 RAB27AP51159 221 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 CLCN5P51795 746 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 GPC5P78333 572 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 SKOR1P84550 965 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 DSC1Q08554 894 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 SNW1Q13573 536 aaKnown RBP7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 ME3Q16798 604 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 FUT10Q6P4F1 479 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 OTOP3Q7RTS5 596 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 SRGAP1Q7Z6B7 1085 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 C4orf19Q8IY42 314 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 CCDC105Q8IYK2 499 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 FBXL16Q8N461 479 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 FGF14Q92915 247 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 TNFRSF25Q93038 417 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 NKD2Q969F2 451 aaPredicted RBP7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 ACSF2Q96CM8 615 aaPredicted RBP7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 TRIM6Q9C030 488 aaPredicted RBP7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 NT5C3AQ9H0P0 336 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 CSRNP2Q9H175 543 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 GOLGA2P5Q9HBQ8 144 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 WDR6Q9NNW5 1121 aaKnown RBP7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 SNTG2Q9NY99 539 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 DUSP12Q9UNI6 340 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 NUMBLQ9Y6R0 609 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 ARID2Q68CP9 1835 aa7.59□□□□□ -1.19
PRPF40B-214ENST00000551320 MED19A0JLT2 244 aaPredicted RBP7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 FSD2A1L4K1 749 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 PFKFB2O60825 505 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 TADA2AO75478 443 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 REC8O95072 547 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 ADH1AP07327 375 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 SPATA31C1P0DKV0 1188 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 SKIP12755 728 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 RFX1P22670 979 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 MCM7P33993 719 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 ARL2P36404 184 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 SLC19A1P41440 591 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 WNT7BP56706 349 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 OSTNP61366 133 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 DSG1Q02413 1049 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 BMS1Q14692 1282 aaKnown RBP7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 ZNF174Q15697 407 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 ECM1Q16610 540 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 FAM171A1Q5VUB5 890 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 NOTUMQ6P988 496 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 TSSK4Q6SA08 328 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 RNF168Q8IYW5 571 aaPredicted RBP7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 RMDN1Q96DB5 314 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 FAM20AQ96MK3 541 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 PRRX2Q99811 253 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 HSD17B14Q9BPX1 270 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 CLSTN3Q9BQT9 956 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 TMEM175Q9BSA9 504 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 PLA2G2FQ9BZM2 168 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 ZSWIM4Q9H7M6 989 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 TTC12Q9H892 705 aaPredicted RBP7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 USTQ9Y2C2 406 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 PCDHB9Q9Y5E1 797 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 OTOGLQ3ZCN5 2332 aa7.58□□□□□ -1.2
PRPF40B-214ENST00000551320 EPG5Q9HCE0 2579 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 TDRD15B5MCY1 1934 aaKnown RBP7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 PROB1E7EW31 1015 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 TBX3O15119 743 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 RECQL4O94761 1208 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 LAMP2P13473 410 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 KRT2P35908 639 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 BRCC3P46736 316 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 RARRES1P49788 294 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 ARPP19P56211 112 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 HTR4Q13639 388 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 CALCRLQ16602 461 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 SEZ6Q53EL9 994 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 PPP4R3AQ6IN85 833 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 LILRA6Q6PI73 481 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 MOXD1Q6UVY6 613 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 OTUD6AQ7L8S5 288 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 PPFIBP1Q86W92 1011 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 TEX2Q8IWB9 1127 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 DIS3L2Q8IYB7 885 aaKnown RBP7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 MAML2Q8IZL2 1156 aaPredicted RBP7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 CEP120Q8N960 986 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 TCP11Q8WWU5 503 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 MCRS1Q96EZ8 462 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 CCDC97Q96F63 343 aaPredicted RBP7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 HINFPQ9BQA5 517 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 COLEC11Q9BWP8 271 aa7.57□□□□□ -1.2
PRPF40B-214ENST00000551320 PDZD7Q9H5P4 517 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms