RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ALKAL1Q6UXT8 129 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 FGF13Q92913 245 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 RTP3Q9BQQ7 232 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 ADPGKQ9BRR6 497 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 LLPHQ9BRT6 129 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 TARS2Q9BW92 718 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 CDT1Q9H211 546 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 PTPRHQ9HD43 1115 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 DLGAP2Q9P1A6 1054 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 DNMT3BQ9UBC3 853 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 CDY1Q9Y6F8 540 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 F5P12259 2224 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 CCDC169A6NNP5 214 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 K7ERI5 159 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 HIP1RO75146 1068 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 B3GAT3O94766 335 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 U2AF2P26368 475 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 RAB33AQ14088 237 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 PPP2R5AQ15172 486 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 SLC5A9Q2M3M2 681 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 SEZ6Q53EL9 994 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 ING5Q8WYH8 240 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 NKD2Q969F2 451 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 C18orf25Q96B23 403 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 IFT74Q96LB3 600 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 MTRRQ9UBK8 725 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 CDH7Q9ULB5 785 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 TNFSF13BQ9Y275 285 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 MTF2Q9Y483 593 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 R4GN57 208 aa12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 KIF26AQ9ULI4 1882 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-212ENST00000551111 SCN1AP35498 2009 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 GPR179Q6PRD1 2367 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 TMEM189-UBE2V1I3L0A0 370 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 SLC16A4O15374 487 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 CD72P21854 359 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 MUTP22033 750 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 EFNA5P52803 228 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 CREMQ03060 361 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 ORC2Q13416 577 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 SNW1Q13573 536 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 PDIA5Q14554 519 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 DCAF4L1Q3SXM0 396 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 XKR4Q5GH76 650 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 RINT1Q6NUQ1 792 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 C1orf186Q6ZWK4 172 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 KIFAP3Q92845 792 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 NXPE3Q969Y0 559 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 PLIN2Q99541 437 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 KXD1Q9BQD3 176 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 PLA2G2FQ9BZM2 168 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 SLC2A4RGQ9NR83 387 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 ARHGAP28Q9P2N2 729 aa12.69□□□□□ -0.38
PRPF40B-212ENST00000551111 COL4A2P08572 1712 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 DNAH14Q0VDD8 3507 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 NPHP3-ACAD11A0A0J9YXS1 232 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 HNRNPA1P09651 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 HARSP12081 509 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 PROZP22891 400 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 GRM5P41594 1212 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 TRAPPC10P48553 1259 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 ZNF568Q3ZCX4 644 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 LIN9Q5TKA1 542 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 HAUS3Q68CZ6 603 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 NPAS3Q8IXF0 933 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 MAML2Q8IZL2 1156 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 FAM184AQ8NB25 1140 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 LRRC15Q8TF66 581 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 PNMA5Q96PV4 448 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 HAPLN2Q9GZV7 340 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 KMT5AQ9NQR1 393 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 SIT1Q9Y3P8 196 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 TCHHQ07283 1943 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 ATG2BQ96BY7 2078 aa12.68□□□□□ -0.38
PRPF40B-212ENST00000551111 WDR27A2RRH5 827 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 SHISA7A6NL88 538 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 TBC1D4O60343 1298 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 CD2BP2O95400 341 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 SEC24AO95486 1093 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 HOXA9P31269 272 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 ARPP19P56211 112 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 STARD6P59095 220 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 ROR1Q01973 937 aa12.67□□□□□ -0.38
PRPF40B-212ENST00000551111 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms