RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ADKP55263 362 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 CLDN10P78369 228 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 MYL7Q01449 175 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 ENPEPQ07075 957 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 LRMPQ12912 555 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 TMEM132AQ24JP5 1023 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 EPC2Q52LR7 807 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 UBXN11Q5T124 520 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 ZNF618Q5T7W0 954 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 BLOC1S3Q6QNY0 202 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 RSPH3Q86UC2 560 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 FAM126BQ8IXS8 530 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 THNSL1Q8IYQ7 743 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 LMO3Q8TAP4 145 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 DIS3LQ8TF46 1054 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 CACTINQ8WUQ7 758 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 ZNF830Q96NB3 372 aaPredicted RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 POP1Q99575 1024 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 CGRRF1Q99675 332 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 TCHPQ9BT92 498 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 HTATIP2Q9BUP3 242 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 LSM14BQ9BX40 385 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 EIF2AQ9BY44 585 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 TMEM117Q9H0C3 514 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 AGO3Q9H9G7 860 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 SIX2Q9NPC8 291 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 RBAKQ9NYW8 714 aaPredicted RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 AJAP1Q9UKB5 411 aaPredicted RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 SCN1AP35498 2009 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 M0QZ92 97 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 PMM2O15305 246 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 C4BPAP04003 597 aaKnown RBP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 RPLP2P05387 115 aaKnown RBP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CXCL8P10145 99 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 DLATP10515 647 aaKnown RBP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 COL6A1P12109 1028 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CKBP12277 381 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 PON1P27169 355 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 AXLP30530 894 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CASP14P31944 242 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 THPOP40225 353 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 GRM5P41594 1212 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 GJA8P48165 433 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 MXI1P50539 228 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 GSDMDP57764 484 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 OSTNP61366 133 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CCZ1BP86790 482 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CCZ1P86791 482 aaPredicted RBP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 TRIM14Q14142 442 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 MBTPS1Q14703 1052 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 PCBP1Q15365 356 aaKnown RBP eCLIP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 ENOX2Q16206 610 aaKnown RBP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 DCAF4L1Q3SXM0 396 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 FIGNQ5HY92 759 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 FBXO47Q5MNV8 452 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 SCARA3Q6AZY7 606 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 NOTUMQ6P988 496 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 GBP6Q6ZN66 633 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 C15orf39Q6ZRI6 1047 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 SV2AQ7L0J3 742 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 TMEM139Q8IV31 216 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 LRRC8AQ8IWT6 810 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 EFCAB13Q8IY85 973 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 TMEM130Q8N3G9 435 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CCDC150Q8NCX0 1101 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 BAP1Q92560 729 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 DPF3Q92784 378 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 SEMA4DQ92854 862 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CCDC127Q96BQ5 260 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 TMEM8AQ9HCN3 771 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 ERVK-5Q9HDB9 667 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 FAM207AQ9NSI2 230 aaPredicted RBP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 GCNT4Q9P109 453 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 CAPN11Q9UMQ6 739 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 PIN4Q9Y237 131 aaKnown RBP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.77□□□□□ -1.01
DEPDC4-207ENST00000549249 A0A1W2PQJ5 194 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 AKR1B15C9JRZ8 316 aaPredicted RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 P4HA2O15460 535 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 MGEA5O60502 916 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 N4BP1O75113 896 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 CAND2O75155 1236 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 RPS6KA5O75582 802 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 VNN1O95497 513 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 TFRCP02786 760 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 CLTAP09496 248 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 STAG3L1P0CL83 205 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 GHRP10912 638 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 TRIM21P19474 475 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 CD52P31358 61 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 GTF2H1P32780 548 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 LPIN1Q14693 890 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 EXOC3L4Q17RC7 722 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 SLC10A6Q3KNW5 377 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 ZACNQ401N2 412 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 HS1BP3Q53T59 392 aa8.76□□□□□ -1.01
DEPDC4-207ENST00000549249 TDRD10Q5VZ19 366 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms