RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PQLC1Q8N2U9 271 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 HOXB13Q92826 284 aaPredicted RBP7.24□□□□□ -1.25
CCDC7-209ENST00000539197 UHRF1Q96T88 793 aaPredicted RBP7.24□□□□□ -1.25
CCDC7-209ENST00000539197 RNPEPQ9H4A4 650 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 KIAA1586Q9HCI6 787 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 FBXO34Q9NWN3 711 aa7.24□□□□□ -1.25
CCDC7-209ENST00000539197 FGFR4P22455 802 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 SCAND1P57086 179 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 SIM1P81133 766 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-209ENST00000539197 ZNF169Q14929 603 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-209ENST00000539197 MUM1Q2TAK8 710 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 SP5Q6BEB4 398 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-209ENST00000539197 Q6ZNX1 250 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 KCNK18Q7Z418 384 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 FAM43AQ8N2R8 423 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 LMBR1Q8WVP7 490 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 AUTS2Q8WXX7 1259 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 TTC1Q99614 292 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 IFT122Q9HBG6 1241 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 TBCCD1Q9NVR7 557 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 MOCS1Q9NZB8 636 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 SLC23A1Q9UHI7 598 aa7.23□□□□□ -1.25
CCDC7-209ENST00000539197 GOLGA8AA7E2F4 631 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 ZEB2O60315 1214 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 POMCP01189 267 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 IL2RBP14784 551 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 GYS2P54840 703 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 PER3P56645 1201 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 CXADRP78310 365 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 HSD11B2P80365 405 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 MRPS9P82933 396 aaKnown RBP7.22□□□□□ -1.25
CCDC7-209ENST00000539197 DDX46Q7L014 1031 aaKnown RBP7.22□□□□□ -1.25
CCDC7-209ENST00000539197 FATE1Q969F0 183 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 FUBP1Q96AE4 644 aaKnown RBP7.22□□□□□ -1.25
CCDC7-209ENST00000539197 BOD1Q96IK1 185 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 GALNT9Q9HCQ5 603 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 TMEM74BQ9NUR3 256 aa7.22□□□□□ -1.25
CCDC7-209ENST00000539197 ATP5JP18859 108 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 GUCY1A2P33402 732 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 SRSF2Q01130 221 aaKnown RBP7.21□□□□□ -1.26
CCDC7-209ENST00000539197 UBXN2BQ14CS0 331 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 SEPT2Q15019 361 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 TOR2AQ5JU69 321 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 UBE3BQ7Z3V4 1068 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 NAF1Q96HR8 494 aaKnown RBP7.21□□□□□ -1.26
CCDC7-209ENST00000539197 WDR26Q9H7D7 661 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 CASS4Q9NQ75 786 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 AJAP1Q9UKB5 411 aaPredicted RBP7.21□□□□□ -1.26
CCDC7-209ENST00000539197 ACTL7AQ9Y615 435 aa7.21□□□□□ -1.26
CCDC7-209ENST00000539197 ZFPL1O95159 310 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 MATN4O95460 622 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 IGLV2-14P01704 120 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 PCSK1P29120 753 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 NOMO1Q15155 1222 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 ZNF529Q6P280 563 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 ACE2Q9BYF1 805 aaPredicted RBP7.2□□□□□ -1.26
CCDC7-209ENST00000539197 SENP6Q9GZR1 1112 aaPredicted RBP7.2□□□□□ -1.26
CCDC7-209ENST00000539197 GREM2Q9H772 168 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 LANCL2Q9NS86 450 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 RBM12Q9NTZ6 932 aaKnown RBP7.2□□□□□ -1.26
CCDC7-209ENST00000539197 FAM30AQ9NZY2 134 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 LRIT1Q9P2V4 623 aa7.2□□□□□ -1.26
CCDC7-209ENST00000539197 APOBEC2Q9Y235 224 aaKnown RBP7.2□□□□□ -1.26
CCDC7-209ENST00000539197 ARHGEF17Q96PE2 2063 aaPredicted RBP7.2□□□□□ -1.26
CCDC7-209ENST00000539197 INO80B-WBP1J3KQ70 363 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 ENPP3O14638 875 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 C1QL1O75973 258 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 GPANK1O95872 356 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 MTHFD2P13995 350 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 GCSHP23434 173 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 SLC6A9P48067 706 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 RARRES1P49788 294 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 MRPS35P82673 323 aaKnown RBP7.19□□□□□ -1.26
CCDC7-209ENST00000539197 MUM1L1Q5H9M0 696 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 FOXR2Q6PJQ5 311 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 ARHGEF25Q86VW2 580 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 INO80BQ9C086 356 aaPredicted RBP7.19□□□□□ -1.26
CCDC7-209ENST00000539197 FOXJ2Q9P0K8 574 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 KCNE5Q9UJ90 142 aa7.19□□□□□ -1.26
CCDC7-209ENST00000539197 CYP2A13Q16696 494 aa7.18□□□□□ -1.26
CCDC7-209ENST00000539197 LHFPL2Q6ZUX7 228 aa7.18□□□□□ -1.26
CCDC7-209ENST00000539197 GLCCI1Q86VQ1 547 aa7.18□□□□□ -1.26
CCDC7-209ENST00000539197 MARS2Q96GW9 593 aaKnown RBP7.18□□□□□ -1.26
CCDC7-209ENST00000539197 ORAI2Q96SN7 254 aa7.18□□□□□ -1.26
CCDC7-209ENST00000539197 AIFM2Q9BRQ8 373 aa7.18□□□□□ -1.26
CCDC7-209ENST00000539197 DMTF1Q9Y222 760 aa7.18□□□□□ -1.26
CCDC7-209ENST00000539197 RUVBL1Q9Y265 456 aaKnown RBP7.18□□□□□ -1.26
CCDC7-209ENST00000539197 LRRC3CA6NJW4 275 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 TAF7LQ5H9L4 462 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 OTUD7BQ6GQQ9 843 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 OR2I1PQ8NGU4 316 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 UNKLQ9H9P5 680 aaKnown RBP7.17□□□□□ -1.26
CCDC7-209ENST00000539197 SEMA4GQ9NTN9 838 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 C14orf119Q9NWQ9 140 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 HSFX1Q9UBD0 423 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 ZBTB21Q9ULJ3 1066 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 FRMD4BQ9Y2L6 1034 aa7.17□□□□□ -1.26
CCDC7-209ENST00000539197 MTO1Q9Y2Z2 717 aaKnown RBP7.17□□□□□ -1.26
CCDC7-209ENST00000539197 OSMP13725 252 aa7.16□□□□□ -1.26
CCDC7-209ENST00000539197 GSPT1P15170 499 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms