RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CLCNKBP51801 687 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 KNOP1Q1ED39 458 aaKnown RBP15.26■□□□□ 0.03
VPS11-205ENST00000534551 TCEAL5Q5H9L2 206 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 JADE1Q6IE81 842 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 SLFN12LQ6IEE8 588 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 KANK3Q6NY19 840 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 CBWD2Q8IUF1 395 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 EFCAB13Q8IY85 973 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 RSPH1Q8WYR4 309 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 SMARCE1Q969G3 411 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 KIF12Q96FN5 646 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 TMEM169Q96HH4 297 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 TCF25Q9BQ70 676 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 TLR9Q9NR96 1032 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 HSPBP1Q9NZL4 362 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 FAN1Q9Y2M0 1017 aa15.26■□□□□ 0.03
VPS11-205ENST00000534551 PTPRJQ12913 1337 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 I3L4J1 428 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 BIN1O00499 593 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 PPEF2O14830 753 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 KCNE1P15382 129 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 GARTP22102 1010 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
VPS11-205ENST00000534551 SCARA3Q6AZY7 606 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 TAS1R1Q7RTX1 841 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 BRSK2Q8IWQ3 736 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 GPT2Q8TD30 523 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 CCDC47Q96A33 483 aaKnown RBP15.25■□□□□ 0.03
VPS11-205ENST00000534551 ZBP1Q9H171 429 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 ENTPD7Q9NQZ7 604 aa15.25■□□□□ 0.03
VPS11-205ENST00000534551 HIDE1A8MVS5 230 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 FSCN2O14926 492 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 EXTL3O43909 919 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 POU3F3P20264 500 aaPredicted RBP15.24■□□□□ 0.03
VPS11-205ENST00000534551 CA8P35219 290 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 RBM10P98175 930 aaKnown RBP15.24■□□□□ 0.03
VPS11-205ENST00000534551 PSMD2Q13200 908 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 PTPROQ16827 1216 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 LMBRD2Q68DH5 695 aaPredicted RBP15.24■□□□□ 0.03
VPS11-205ENST00000534551 FUT10Q6P4F1 479 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 CD300LGQ6UXG3 332 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 VPS52Q8N1B4 723 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 GPD1LQ8N335 351 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 SPATA20Q8TB22 786 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 CCDC34Q96HJ3 373 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 GPR62Q9BZJ7 368 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 LMAN2LQ9H0V9 348 aa15.24■□□□□ 0.03
VPS11-205ENST00000534551 RBAKQ9NYW8 714 aaPredicted RBP15.24■□□□□ 0.03
VPS11-205ENST00000534551 SPTBN5Q9NRC6 3674 aaKnown RBP15.23■□□□□ 0.03
VPS11-205ENST00000534551 C5orf42Q9H799 3197 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 PODXLO00592 558 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 C2CD2LO14523 706 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 SMC2O95347 1197 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 SLC34A2O95436 690 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 EFEMP2O95967 443 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 ALDH2P05091 517 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 BMP6P22004 513 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 PRCPP42785 496 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 BRCC3P46736 316 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 UBE3AQ05086 875 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 TMEM132DQ14C87 1099 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 UPP1Q16831 310 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 TIGD5Q53EQ6 642 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 HS2ST1Q7LGA3 356 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 RBM23Q86U06 439 aaKnown RBP15.23■□□□□ 0.03
VPS11-205ENST00000534551 RNF168Q8IYW5 571 aaPredicted RBP15.23■□□□□ 0.03
VPS11-205ENST00000534551 RDH13Q8NBN7 331 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 HERC2P3Q9BVR0 1158 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 NSUN3Q9H649 340 aaKnown RBP15.23■□□□□ 0.03
VPS11-205ENST00000534551 PDE11AQ9HCR9 933 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 ADAM28Q9UKQ2 775 aa15.23■□□□□ 0.03
VPS11-205ENST00000534551 TRIM49BA6NDI0 452 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 PER2O15055 1255 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 LINC01565O15544 149 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 NR3C1P04150 777 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
VPS11-205ENST00000534551 CASP4P49662 377 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 PMS1P54277 932 aaKnown RBP15.22■□□□□ 0.03
VPS11-205ENST00000534551 KRT17Q04695 432 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 HYAL1Q12794 435 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 SKIV2LQ15477 1246 aaKnown RBP15.22■□□□□ 0.03
VPS11-205ENST00000534551 ZBTB6Q15916 424 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 KYAT1Q16773 422 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 ZNF658Q5TYW1 1059 aaPredicted RBP15.22■□□□□ 0.03
VPS11-205ENST00000534551 TMC7Q7Z402 723 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 DDX53Q86TM3 631 aaKnown RBP15.22■□□□□ 0.03
VPS11-205ENST00000534551 MICAL1Q8TDZ2 1067 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 GSDMAQ96QA5 445 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 RMND1Q9NWS8 449 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 C2orf16Q68DN1 1984 aa15.22■□□□□ 0.03
VPS11-205ENST00000534551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.21■□□□□ 0.03
VPS11-205ENST00000534551 B3GAT3O94766 335 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 CTSAP10619 480 aa15.21■□□□□ 0.03
VPS11-205ENST00000534551 NRIP1P48552 1158 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms