RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 DNASE1L2Q92874 299 aa14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 ELSPBP1Q96BH3 223 aa14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 CHAMP1Q96JM3 812 aa14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 CHRDQ9H2X0 955 aa14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 PDZD7Q9H5P4 517 aa14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 BRD9Q9H8M2 597 aa14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 GPRC5CQ9NQ84 441 aa14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 PRMT7Q9NVM4 692 aaPredicted RBP14.38□□□□□ -0.11
CLNS1A-207ENST00000527133 A0A087WWV3 80 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 USO1O60763 962 aaKnown RBP14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 LYPLA2O95372 231 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 IGFBP6P24592 240 aaPredicted RBP14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 RARRES1P49788 294 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 PPP2R5DQ14738 602 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 LAIR1Q6GTX8 287 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 PRR23BQ6ZRT6 265 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 RUFY3Q7L099 469 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 RTL10Q7L3V2 364 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 NOSTRINQ8IVI9 506 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 ZNF687Q8N1G0 1237 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 CELF5Q8N6W0 485 aaKnown RBP14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 PIGOQ8TEQ8 1089 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 GJB4Q9NTQ9 266 aa14.37□□□□□ -0.11
CLNS1A-207ENST00000527133 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 SLC30A4O14863 429 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 N4BP3O15049 544 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 B3GAT3O94766 335 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 FCARP24071 287 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 TKTP29401 623 aaKnown RBP14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 EARS2Q5JPH6 523 aaKnown RBP14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 ZBTB8OSQ8IWT0 167 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 CORO1BQ9BR76 489 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 FZD8Q9H461 694 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 PCDHA12Q9UN75 941 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 USP20Q9Y2K6 914 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 GDAQ9Y2T3 454 aa14.36□□□□□ -0.11
CLNS1A-207ENST00000527133 TMEM189-UBE2V1I3L0A0 370 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 I3L4J1 428 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 PRRG1O14668 218 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 DTNBO60941 627 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 LRG1P02750 347 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 RETP07949 1114 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 PTPN2P17706 415 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 LIG1P18858 919 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 KCNA4P22459 653 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 CCR3P51677 355 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 CLCNKBP51801 687 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 PRPF4BQ13523 1007 aaKnown RBP14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 FAM78AQ5JUQ0 283 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 GLRA4Q5JXX5 417 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 CDCA2Q69YH5 1023 aaPredicted RBP14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 ANKS3Q6ZW76 656 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 FAM3CQ92520 227 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 TCEAL4Q96EI5 215 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 DDX27Q96GQ7 796 aaKnown RBP14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 TRMT61BQ9BVS5 477 aaKnown RBP14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 LMAN1LQ9HAT1 526 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 ZSWIM6Q9HCJ5 1215 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 ZFP14Q9HCL3 533 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 AVENQ9NQS1 362 aaPredicted RBP14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 BACE2Q9Y5Z0 518 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 FRYQ5TBA9 3013 aa14.35□□□□□ -0.11
CLNS1A-207ENST00000527133 ARHGEF37A1IGU5 675 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 NRG2O14511 850 aaPredicted RBP14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 XBP1P17861 261 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 GDI1P31150 447 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 ELF1P32519 619 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 SATB1Q01826 763 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 ROR1Q01973 937 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 SIM2Q14190 667 aaPredicted RBP14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 CALCRLQ16602 461 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 MAPK6Q16659 721 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 FAM187BQ17R55 369 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 PRSS36Q5K4E3 855 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 ADPGKQ9BRR6 497 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 IER2Q9BTL4 223 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 TTC12Q9H892 705 aaPredicted RBP14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 SEMA4GQ9NTN9 838 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 CYP46A1Q9Y6A2 500 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 PIAS3Q9Y6X2 628 aa14.34□□□□□ -0.11
CLNS1A-207ENST00000527133 TRAPPC3O43617 180 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 LRP3O75074 770 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 CDKL5O76039 1030 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 EDN1P05305 212 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 PRKCBP05771 671 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 BRCC3P46736 316 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 CXCL12P48061 93 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 RBM25P49756 843 aaKnown RBP14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 ARPP19P56211 112 aa14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 SRSF5Q13243 272 aaKnown RBP14.33□□□□□ -0.12
CLNS1A-207ENST00000527133 NR5A1Q13285 461 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms