RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SGSM2O43147 1006 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 EDIL3O43854 480 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 AKAP3O75969 853 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 TOP3BO95985 862 aaKnown RBP19.44■□□□□ 0.7
PVT1-220ENST00000524165 CEACAM1P13688 526 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 GNA11P29992 359 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 RFC5P40937 340 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 USP11P51784 963 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 SH3PXD2AQ5TCZ1 1133 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 DAB2IPQ5VWQ8 1189 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.44■□□□□ 0.7
PVT1-220ENST00000524165 FERMT3Q86UX7 667 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 TCP11Q8WWU5 503 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 GJA10Q969M2 543 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 EDEM2Q9BV94 578 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 RWDD1Q9H446 243 aaPredicted RBP19.44■□□□□ 0.7
PVT1-220ENST00000524165 TRPV4Q9HBA0 871 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 WDR27A2RRH5 827 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 LRG1P02750 347 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 RBM25P49756 843 aaKnown RBP19.43■□□□□ 0.7
PVT1-220ENST00000524165 NPEPPSP55786 919 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 PTENP60484 403 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 WDR44Q5JSH3 913 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 MFSD6LQ8IWD5 586 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 SYNPOQ8N3V7 929 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 CSGALNACT1Q8TDX6 532 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 KLK14Q9P0G3 267 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 CDY1Q9Y6F8 540 aa19.43■□□□□ 0.7
PVT1-220ENST00000524165 ARID2Q68CP9 1835 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 CASTOR2A6NHX0 329 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 C4orf47A7E2U8 309 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 ZBTB43O43298 467 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 CCDC192P0DO97 292 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 CSRP1P21291 193 aaKnown RBP19.42■□□□□ 0.7
PVT1-220ENST00000524165 FGFR3P22607 806 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 SOWAHCQ53LP3 525 aaPredicted RBP19.42■□□□□ 0.7
PVT1-220ENST00000524165 BICD2Q8TD16 824 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 TCEAL4Q96EI5 215 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 CEP170P1Q96L14 293 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 CORO1BQ9BR76 489 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 NEUROG3Q9Y4Z2 214 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 BACE2Q9Y5Z0 518 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 LAMA5O15230 3695 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 NUP205Q92621 2012 aa19.42■□□□□ 0.7
PVT1-220ENST00000524165 GSPT1P15170 499 aaKnown RBP19.41■□□□□ 0.7
PVT1-220ENST00000524165 ARF4P18085 180 aaPredicted RBP19.41■□□□□ 0.7
PVT1-220ENST00000524165 HOXC13P31276 330 aa19.41■□□□□ 0.7
PVT1-220ENST00000524165 Q4G0T1 1027 aa19.41■□□□□ 0.7
PVT1-220ENST00000524165 TCEAL6Q6IPX3 200 aa19.41■□□□□ 0.7
PVT1-220ENST00000524165 SLC27A1Q6PCB7 646 aa19.41■□□□□ 0.7
PVT1-220ENST00000524165 PDZD4Q76G19 769 aaPredicted RBP19.41■□□□□ 0.7
PVT1-220ENST00000524165 IFNLR1Q8IU57 520 aaPredicted RBP19.41■□□□□ 0.7
PVT1-220ENST00000524165 ZNF579Q8NAF0 562 aaKnown RBP19.41■□□□□ 0.7
PVT1-220ENST00000524165 TCEAL3Q969E4 200 aa19.41■□□□□ 0.7
PVT1-220ENST00000524165 E2F7Q96AV8 911 aa19.41■□□□□ 0.7
PVT1-220ENST00000524165 PARP2Q9UGN5 583 aa19.41■□□□□ 0.7
PVT1-220ENST00000524165 MAST4O15021 2626 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 FREM2Q5SZK8 3169 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 MYBPHLA2RUH7 354 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 INO80B-WBP1J3KQ70 363 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 DKC1O60832 514 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■■■■■ 27.2
PVT1-220ENST00000524165 VIPR2P41587 438 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 CCR2P41597 374 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 KPNA1P52294 538 aaPredicted RBP19.4■□□□□ 0.7
PVT1-220ENST00000524165 POU5F1BQ06416 359 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 CCINQ13939 588 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 MXD4Q14582 209 aaPredicted RBP19.4■□□□□ 0.7
PVT1-220ENST00000524165 AMHR2Q16671 573 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 RALGPS2Q86X27 583 aaPredicted RBP19.4■□□□□ 0.7
PVT1-220ENST00000524165 ZSWIM3Q96MP5 696 aa19.4■□□□□ 0.7
PVT1-220ENST00000524165 CHADO15335 359 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 NPTXRO95502 500 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 QARSP47897 775 aaKnown RBP19.39■□□□□ 0.69
PVT1-220ENST00000524165 MBTD1Q05BQ5 628 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 EMC2Q15006 297 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 CYP4A22Q5TCH4 519 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 ZNF461Q8TAF7 563 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 MSRB2Q9Y3D2 182 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 PCNX2A6NKB5 2137 aa19.39■□□□□ 0.69
PVT1-220ENST00000524165 SLC38A8A6NNN8 435 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 SPECC1L-ADORA2AF8WAN1 911 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 NCANO14594 1321 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 THP07101 528 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 CDC27P30260 824 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 ELF1P32519 619 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 CTHP32929 405 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 NAB2Q15742 525 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 PLK5Q496M5 336 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 TXNDC11Q6PKC3 985 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 ANKS3Q6ZW76 656 aa19.38■□□□□ 0.69
PVT1-220ENST00000524165 ZSCAN18Q8TBC5 510 aaPredicted RBP19.38■□□□□ 0.69
PVT1-220ENST00000524165 ASCC3Q8N3C0 2202 aaKnown RBP19.37■□□□□ 0.69
PVT1-220ENST00000524165 A0A1B0GUA9 196 aa19.37■□□□□ 0.69
PVT1-220ENST00000524165 GOLGA8AA7E2F4 631 aa19.37■□□□□ 0.69
PVT1-220ENST00000524165 GOLGA8BA8MQT2 603 aa19.37■□□□□ 0.69
PVT1-220ENST00000524165 HEPACAM2A8MVW5 462 aa19.37■□□□□ 0.69
PVT1-220ENST00000524165 TMEM189-UBE2V1I3L0A0 370 aa19.37■□□□□ 0.69
PVT1-220ENST00000524165 PRRG1O14668 218 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms