RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PTPRHQ9HD43 1115 aa27.78■■■□□ 2.04
COL13A1-214ENST00000522165 IGBP1P78318 339 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 MRPS25P82663 173 aaKnown RBP27.77■■■□□ 2.04
COL13A1-214ENST00000522165 CUL2Q13617 745 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 WDR49Q8IV35 697 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 RASGEF1CQ8N431 466 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 MAML3Q96JK9 1138 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 STIM2Q9P246 746 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 CPSF3Q9UKF6 684 aaKnown RBP27.77■■■□□ 2.04
COL13A1-214ENST00000522165 INO80B-WBP1J3KQ70 363 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 MTA2O94776 668 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 ACO1P21399 889 aaKnown RBP27.77■■■□□ 2.04
COL13A1-214ENST00000522165 SLC7A5Q01650 507 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 C11orf63Q6NUN7 778 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 MPZL3Q6UWV2 235 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 PLEKHH3Q7Z736 793 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 MSL3Q8N5Y2 521 aaKnown RBP27.77■■■□□ 2.04
COL13A1-214ENST00000522165 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.77■■■□□ 2.04
COL13A1-214ENST00000522165 INO80BQ9C086 356 aaPredicted RBP27.77■■■□□ 2.04
COL13A1-214ENST00000522165 PCDHB2Q9Y5E7 798 aa27.77■■■□□ 2.04
COL13A1-214ENST00000522165 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.76■■■□□ 2.03
COL13A1-214ENST00000522165 PGRMC1O00264 195 aaKnown RBP27.76■■■□□ 2.03
COL13A1-214ENST00000522165 DDX3YO15523 660 aaKnown RBP27.76■■■□□ 2.03
COL13A1-214ENST00000522165 PHACTR2O75167 634 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 MYBL2P10244 700 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 MBTD1Q05BQ5 628 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 NCOA4Q13772 614 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 CASP8Q14790 479 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 ATF7IP2Q5U623 682 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 NFKBIZQ9BYH8 718 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 EVPLQ92817 2033 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 CALCAP01258 141 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 CYP1A2P05177 515 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 CLTAP09496 248 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 BPIFB4P59827 614 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 CLEC16AQ2KHT3 1053 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 ACAD10Q6JQN1 1059 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 ZNF677Q86XU0 584 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 LINC01465Q8N7H1 131 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 C16orf70Q9BSU1 422 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 MINDY3Q9H8M7 445 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 GTF3C4Q9UKN8 822 aa27.76■■■□□ 2.03
COL13A1-214ENST00000522165 MAGEB2O15479 319 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 B4GALT5O43286 388 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 PPFIA4O75335 1185 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 ZNF286BP0CG31 522 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 MAPK4P31152 587 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 NOP14P78316 857 aaKnown RBP27.75■■■□□ 2.03
COL13A1-214ENST00000522165 KRT12Q99456 494 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 HINFPQ9BQA5 517 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 NOC2LQ9Y3T9 749 aaKnown RBP27.75■■■□□ 2.03
COL13A1-214ENST00000522165 NUB1Q9Y5A7 615 aa27.75■■■□□ 2.03
COL13A1-214ENST00000522165 TBXAS1P24557 533 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-214ENST00000522165 TNNC1P63316 161 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 POU5F1BQ06416 359 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 SURF1Q15526 300 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 ALG6Q9Y672 507 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 ATMINO43313 823 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-214ENST00000522165 SMC1AQ14683 1233 aaKnown RBP27.74■■■□□ 2.03
COL13A1-214ENST00000522165 GSPT2Q8IYD1 628 aaKnown RBP27.74■■■□□ 2.03
COL13A1-214ENST00000522165 TINF2Q9BSI4 451 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 IFT122Q9HBG6 1241 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 ST7Q9NRC1 585 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 CHORDC1Q9UHD1 332 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-214ENST00000522165 COL1A2P08123 1366 aa27.74■■■□□ 2.03
COL13A1-214ENST00000522165 UMODL1Q5DID0 1318 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 SMPD1P17405 629 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 ZNF568Q3ZCX4 644 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 DUSP28Q4G0W2 176 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 EEF1DP3Q658K8 133 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 SCARA3Q6AZY7 606 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 ZNF653Q96CK0 615 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 TTC7AQ9ULT0 858 aaPredicted RBP27.73■■■□□ 2.03
COL13A1-214ENST00000522165 CNTN6Q9UQ52 1028 aa27.73■■■□□ 2.03
COL13A1-214ENST00000522165 IQCF3P0C7M6 154 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 UNGP13051 313 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-214ENST00000522165 TNFRSF8P28908 595 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 FAM212AQ96EL1 285 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 MTMR12Q9C0I1 747 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 ABHD16BQ9H3Z7 469 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 TNFSF13BQ9Y275 285 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 PHKA2P46019 1235 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 ACVR2BQ13705 512 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 DCAF12L1Q5VU92 463 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 CST9Q5W186 159 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 NPLOC4Q8TAT6 608 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 AENQ8WTP8 325 aaKnown RBP27.72■■■□□ 2.03
COL13A1-214ENST00000522165 NUP85Q9BW27 656 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 PRMT7Q9NVM4 692 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-214ENST00000522165 PCDHB4Q9Y5E5 795 aa27.72■■■□□ 2.03
COL13A1-214ENST00000522165 SLC15A5A6NIM6 579 aa27.71■■■□□ 2.03
COL13A1-214ENST00000522165 ASS1P00966 412 aaKnown RBP27.71■■■□□ 2.03
COL13A1-214ENST00000522165 CST3P01034 146 aaPredicted RBP27.71■■■□□ 2.03
COL13A1-214ENST00000522165 HOXD8P13378 290 aaPredicted RBP27.71■■■□□ 2.03
COL13A1-214ENST00000522165 FAM187BQ17R55 369 aa27.71■■■□□ 2.03
COL13A1-214ENST00000522165 DUOXA2Q1HG44 320 aa27.71■■■□□ 2.03
COL13A1-214ENST00000522165 TMEM132AQ24JP5 1023 aa27.71■■■□□ 2.03
COL13A1-214ENST00000522165 IFNLR1Q8IU57 520 aaPredicted RBP27.71■■■□□ 2.03
COL13A1-214ENST00000522165 THNSL1Q8IYQ7 743 aa27.71■■■□□ 2.03
COL13A1-214ENST00000522165 ZNF564Q8TBZ8 553 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms