RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 SYCE2Q6PIF2 218 aa23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 CD302Q8IX05 232 aa23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 RIPOR3Q96MK2 946 aa23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 TTPALQ9BTX7 342 aa23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 MSTO1Q9BUK6 570 aa23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 PHF7Q9BWX1 381 aaPredicted RBP23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 SFXN1Q9H9B4 322 aa23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 KBTBD4Q9NVX7 518 aa23.27■■□□□ 1.32
UBE2D3-229ENST00000510129 A0A087X0B3 334 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 A0A0B4J269 797 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 FRMD3A2A2Y4 597 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 SPDYE4A6NLX3 237 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 MTHFRP42898 656 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 DNM1Q05193 864 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 PPP2R3AQ06190 1150 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 POSTNQ15063 836 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 FOXD4L6Q3SYB3 417 aaPredicted RBP23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 SHC4Q6S5L8 630 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 FOXD4L3Q6VB84 417 aaPredicted RBP23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 TAS1R1Q7RTX1 841 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 HDAC7Q8WUI4 952 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 RIN2Q8WYP3 895 aaPredicted RBP23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 FBXL18Q96ME1 805 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 PAAF1Q9BRP4 392 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 PANK4Q9NVE7 773 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 PCDHA7Q9UN72 937 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 CITO14578 2027 aa23.26■■□□□ 1.31
UBE2D3-229ENST00000510129 F8W810 466 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 TEX28O15482 410 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 GLUD1P00367 558 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 CLCNKBP51801 687 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 E2F4Q16254 413 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 SLC10A6Q3KNW5 377 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 FAM171A1Q5VUB5 890 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 CNNM4Q6P4Q7 775 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 CYP26C1Q6V0L0 522 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 DHX58Q96C10 678 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 ACCSQ96QU6 501 aa23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 RPF1Q9H9Y2 349 aaKnown RBP23.25■■□□□ 1.31
UBE2D3-229ENST00000510129 TTC28Q96AY4 2481 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 PPP1R37O75864 691 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 ALADP13716 330 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 EPCAMP16422 314 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 ATAT1Q5SQI0 421 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 RESP18Q5W5W9 173 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 PIK3R5Q8WYR1 880 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 RABGGTAQ92696 567 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 STRA6Q9BX79 667 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 C1QTNF1Q9BXJ1 281 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 CXCL16Q9H2A7 254 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 PLEKHA4Q9H4M7 779 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 TMEM206Q9H813 350 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 STYXL1Q9Y6J8 313 aa23.24■■□□□ 1.31
UBE2D3-229ENST00000510129 TTC26A0AVF1 554 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 GCNT3O95395 438 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 CXCL8P10145 99 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 CYP3A5P20815 502 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 ZC2HC1CQ53FD0 456 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 L1TD1Q5T7N2 865 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 HASPINQ8TF76 798 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 SPATA32Q96LK8 384 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 ZMAT2Q96NC0 199 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 SCAND2PQ9GZW5 306 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 CACNG4Q9UBN1 327 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 UBQLN1Q9UMX0 589 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 NR2E1Q9Y466 385 aa23.23■■□□□ 1.31
UBE2D3-229ENST00000510129 XIRP2A4UGR9 3374 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 PODXLO00592 558 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 POLR2DO15514 142 aaKnown RBP23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 FGFR3P22607 806 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 PAX3P23760 479 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 ADALQ6DHV7 355 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 C15orf39Q6ZRI6 1047 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 ANKS3Q6ZW76 656 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 CEP57Q86XR8 500 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 CMASQ8NFW8 434 aaPredicted RBP23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 RHOBTB2Q9BYZ6 727 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 TRIM9Q9C026 710 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 CPSF3Q9UKF6 684 aaKnown RBP23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 KCNH3Q9ULD8 1083 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 DERAQ9Y315 318 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 NUB1Q9Y5A7 615 aa23.22■■□□□ 1.31
UBE2D3-229ENST00000510129 FAM189A1O60320 539 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 ADRB2P07550 413 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 SOX4Q06945 474 aaPredicted RBP23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 PSMD5Q16401 504 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 SEZ6Q53EL9 994 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 RTP2Q5QGT7 225 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 RARS2Q5T160 578 aaKnown RBP23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 CEP57L1Q8IYX8 460 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 SYCP3Q8IZU3 236 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 KIF12Q96FN5 646 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 C7orf25Q9BPX7 421 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 HAPLN2Q9GZV7 340 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 ASB7Q9H672 318 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 USP25Q9UHP3 1055 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 AGO2Q9UKV8 859 aaKnown RBP23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 TRIP11Q15643 1979 aa23.21■■□□□ 1.31
UBE2D3-229ENST00000510129 NCOR1O75376 2440 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms