RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 CCDC125Q86Z20 511 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 EIF1ADQ8N9N8 165 aaKnown RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ART4Q93070 314 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ABTB1Q969K4 478 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SMC6Q96SB8 1091 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SPZ1Q9BXG8 430 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 TRABDQ9H4I3 376 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 DBNDD1Q9H9R9 158 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 WDR35Q9P2L0 1181 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 HEY2Q9UBP5 337 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SCAF8Q9UPN6 1271 aaKnown RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SH3BP1Q9Y3L3 701 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ABCB11O95342 1321 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 EMSYQ7Z589 1322 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SYNGAP1Q96PV0 1343 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 FAM47DPA6NHR8 397 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 BMP3P12645 472 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ATF7P17544 494 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 AMPD1P23109 780 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ADRA1DP25100 572 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 SLC12A3P55017 1021 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 GPC5P78333 572 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ATP13A4Q4VNC1 1196 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 SBK1Q52WX2 424 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PLEKHG4Q58EX7 1191 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CCDC174Q6PII3 467 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ARHGAP22Q7Z5H3 698 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 KBTBD2Q8IY47 623 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CFAP61Q8NHU2 1237 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ASAP3Q8TDY4 903 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CPA5Q8WXQ8 436 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 USP6NLQ92738 828 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 MAGEB18Q96M61 343 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 RBM15Q96T37 977 aaKnown RBP eCLIP8.1□□□□□ -1.116e-7■■□□□ 13.6
NEDD9-208ENST00000504387 GORASP1Q9BQQ3 440 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 LMCD1Q9NZU5 365 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PRKAG3Q9UGI9 489 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ANAPC7Q9UJX3 599 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 FRMD4BQ9Y2L6 1034 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 LRRC42Q9Y546 428 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PCDHAC2Q9Y5I4 1007 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 COL18A1P39060 1754 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 COL4A1P02462 1669 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CCDC195A0A1B0GUA6 201 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 A6NJR5 290 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 EML1O00423 815 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 SORBS3O60504 671 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 TTLL1O95922 423 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 MARK3P27448 753 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 SERPINB3P29508 390 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PSMC2P35998 433 aaKnown RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PRKCIP41743 596 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 JAM2P57087 298 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 IRX4P78413 519 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ODR4Q5SWX8 454 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 IZUMO3Q5VZ72 239 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 OLFML2BQ68BL8 750 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CLEC4GQ6UXB4 293 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 GALNT15Q8N3T1 639 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 TTC17Q96AE7 1141 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 RUNDC3BQ96NL0 473 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PI4K2AQ9BTU6 479 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CADM1Q9BY67 442 aaKnown RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 STK33Q9BYT3 514 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 SMYD3Q9H7B4 428 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PARP2Q9UGN5 583 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CNOT7Q9UIV1 285 aaKnown RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CICQ96RK0 1608 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 KRT4P19013 534 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 GAD2Q05329 585 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 MCL1Q07820 350 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 P3H1Q32P28 736 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 TMEM63BQ5T3F8 832 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 OTOAQ7RTW8 1153 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 FAM178BQ8IXR5 827 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 ZBED8Q8IZ13 594 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PPFIBP2Q8ND30 876 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 FBXO27Q8NI29 283 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 MAML1Q92585 1016 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 CCDC124Q96CT7 223 aaKnown RBP8.1□□□□□ -1.11
NEDD9-208ENST00000504387 LZTS2Q9BRK4 669 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 NARFQ9UHQ1 456 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 PACSIN3Q9UKS6 424 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 USP20Q9Y2K6 914 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 LTBP4Q8N2S1 1624 aa8.1□□□□□ -1.11
NEDD9-208ENST00000504387 TMEM150BA6NC51 233 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 ENO1P06733 434 aaKnown RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 RALAP11233 206 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 DYNLT1P63172 113 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 BTKQ06187 659 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 MAPK6Q16659 721 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 LMBRD2Q68DH5 695 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 LRRC74BQ6ZQY2 392 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 NOP9Q86U38 636 aaKnown RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 MAIP1Q8WWC4 291 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms