RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 CLRN3Q8NCR9 226 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 ZFP28Q8NHY6 868 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 ACTRT2Q8TDY3 377 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 RTF1Q92541 710 aaKnown RBP4.39□□□□□ -1.71
PHC3-216ENST00000497171 ASPSCR1Q9BZE9 553 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 CASS4Q9NQ75 786 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 C14orf119Q9NWQ9 140 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 TCEAL9Q9UHQ7 104 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 WASHC2AQ641Q2 1341 aa4.39□□□□□ -1.71
PHC3-216ENST00000497171 LRRC3CA6NJW4 275 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 GOLGA8AA7E2F4 631 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 ORC4O43929 436 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 KDM1AO60341 852 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 PCDH8O95206 1070 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 LY86O95711 162 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 MT-CO1P00395 513 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 MYBL2P10244 700 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 CCND1P24385 295 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 CD69Q07108 199 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 FAPQ12884 760 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 TERF2Q15554 542 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 CLUL1Q15846 466 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 EZH2Q15910 746 aaKnown RBP4.38□□□□□ -1.71
PHC3-216ENST00000497171 PTPN21Q16825 1174 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 SYDE2Q5VT97 1194 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 LMBR1LQ6UX01 489 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 TAS1R1Q7RTX1 841 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 SYT12Q8IV01 421 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 PPP1R14CQ8TAE6 165 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 FERMT2Q96AC1 680 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 REXO4Q9GZR2 422 aaKnown RBP4.38□□□□□ -1.71
PHC3-216ENST00000497171 POFUT1Q9H488 388 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 MSRAQ9UJ68 235 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 DMTF1Q9Y222 760 aa4.38□□□□□ -1.71
PHC3-216ENST00000497171 WDR91A4D1P6 747 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 BMP15O95972 392 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 CFIP05156 583 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
PHC3-216ENST00000497171 TTF1Q15361 905 aaPredicted RBP4.37□□□□□ -1.71
PHC3-216ENST00000497171 SRSF7Q16629 238 aaKnown RBP eCLIP4.37□□□□□ -1.71
PHC3-216ENST00000497171 ESRP1Q6NXG1 681 aaKnown RBP4.37□□□□□ -1.71
PHC3-216ENST00000497171 PGM2L1Q6PCE3 622 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 PDZD4Q76G19 769 aaPredicted RBP4.37□□□□□ -1.71
PHC3-216ENST00000497171 ZBTB46Q86UZ6 589 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 RASSF3Q86WH2 238 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 CMIPQ8IY22 773 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 KLK15Q9H2R5 256 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 ALG13Q9NP73 1137 aaKnown RBP4.37□□□□□ -1.71
PHC3-216ENST00000497171 AASDHPPTQ9NRN7 309 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 TOPORSQ9NS56 1045 aaPredicted RBP4.37□□□□□ -1.71
PHC3-216ENST00000497171 KCNG1Q9UIX4 513 aa4.37□□□□□ -1.71
PHC3-216ENST00000497171 TBKBP1A7MCY6 615 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 GABRDO14764 452 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 IARSP41252 1262 aaKnown RBP4.36□□□□□ -1.71
PHC3-216ENST00000497171 NEK2P51955 445 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 CCDC178Q5BJE1 867 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 FAM102AQ5T9C2 384 aaPredicted RBP4.36□□□□□ -1.71
PHC3-216ENST00000497171 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 ZNF788Q6ZQV5 615 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 FRMD7Q6ZUT3 714 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 PNMA8AQ86V59 439 aaPredicted RBP4.36□□□□□ -1.71
PHC3-216ENST00000497171 GLB1L2Q8IW92 636 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 RAVER1Q8IY67 606 aaKnown RBP4.36□□□□□ -1.71
PHC3-216ENST00000497171 SH2D3CQ8N5H7 860 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 ZNF610Q8N9Z0 462 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 RNF169Q8NCN4 708 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 TGFBRAP1Q8WUH2 860 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 ANO3Q9BYT9 981 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 ZMAT4Q9H898 229 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 MKS1Q9NXB0 559 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 MYPNQ86TC9 1320 aa4.36□□□□□ -1.71
PHC3-216ENST00000497171 XPOTO43592 962 aaKnown RBP4.35□□□□□ -1.71
PHC3-216ENST00000497171 C1QL1O75973 258 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 PARNO95453 639 aaKnown RBP4.35□□□□□ -1.71
PHC3-216ENST00000497171 CT47B1P0C2W7 299 aaPredicted RBP4.35□□□□□ -1.71
PHC3-216ENST00000497171 PTGER1P34995 402 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 PHC1P78364 1004 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 OCA2Q04671 838 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 KLF1Q13351 362 aaPredicted RBP4.35□□□□□ -1.71
PHC3-216ENST00000497171 ACAP2Q15057 778 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 GPR158Q5T848 1215 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 BTNL9Q6UXG8 535 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 UNQ6494/PRO21346Q6UXR6 183 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 GPR149Q86SP6 731 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 FMNL3Q8IVF7 1028 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 MAPKAPK5Q8IW41 473 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 WDR75Q8IWA0 830 aaKnown RBP4.35□□□□□ -1.71
PHC3-216ENST00000497171 AMOTL1Q8IY63 956 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 OR56A1Q8NGH5 318 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 RNF31Q96EP0 1072 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 ASB6Q9NWX5 421 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 USP18Q9UMW8 372 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 THRAP3Q9Y2W1 955 aaKnown RBP4.35□□□□□ -1.71
PHC3-216ENST00000497171 EID1Q9Y6B2 187 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 TNKSO95271 1327 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 SALL3Q9BXA9 1300 aa4.35□□□□□ -1.71
PHC3-216ENST00000497171 SETD1BQ9UPS6 1966 aaKnown RBP4.34□□□□□ -1.71
PHC3-216ENST00000497171 SHTN1A0MZ66 631 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms