RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 SH3GL2Q99962 352 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 FAM167BQ9BTA0 163 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 HEY1Q9Y5J3 304 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 VIL1P09327 827 aaKnown RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 CDH8P55286 799 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 ANGEL2Q5VTE6 544 aaKnown RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 SPOCK2Q92563 424 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 TMEM121Q9BTD3 319 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 CARD9Q9H257 536 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 PABPC3Q9H361 631 aaKnown RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 HOMER3Q9NSC5 361 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 GINM1Q9NU53 330 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 ABCF3Q9NUQ8 709 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 ENTPD3O75355 529 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 SKAP2O75563 359 aaPredicted RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 CYP3A7P24462 503 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 PEX19P40855 299 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 PPP6R3Q5H9R7 873 aaPredicted RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 CASC4Q6P4E1 433 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 ANO5Q75V66 913 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 FAM160B2Q86V87 743 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 CCDC60Q8IWA6 550 aaPredicted RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 NSRP1Q9H0G5 558 aaKnown RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 AGO4Q9HCK5 861 aaKnown RBP14.32□□□□□ -0.12
GPC1-209ENST00000495100 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.32□□□□□ -0.12
GPC1-209ENST00000495100 MYH11P35749 1972 aa14.32□□□□□ -0.12
GPC1-209ENST00000495100 ZMYM2Q9UBW7 1377 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 TCF4P15884 667 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 RGS7P49802 495 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 ARSEP51690 589 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 CLNS1AP54105 237 aaKnown RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 PTENP60484 403 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 GJC2Q5T442 439 aaPredicted RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 EPM2AIP1Q7L775 607 aaPredicted RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 RNF149Q8NC42 400 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 GMCL1P1Q8NEA9 526 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 HES6Q96HZ4 224 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 PDCD2LQ9BRP1 358 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 JPH1Q9HDC5 661 aaPredicted RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 TTLL3Q9Y4R7 772 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 KIAA0391O15091 583 aaKnown RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 KITP10721 976 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 EZRP15311 586 aaKnown RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 CHRNA3P32297 505 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 GTF2H1P32780 548 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
GPC1-209ENST00000495100 IRX3P78415 501 aaPredicted RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 DNAJC24Q6P3W2 148 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 C15orf52Q6ZUT6 534 aaKnown RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 CEP120Q8N960 986 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 PARD3BQ8TEW8 1205 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 TGS1Q96RS0 853 aaKnown RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 RBM15Q96T37 977 aaKnown RBP eCLIP14.31□□□□□ -0.12
GPC1-209ENST00000495100 MTMR12Q9C0I1 747 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 DDX3YO15523 660 aaKnown RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 ADSSP30520 456 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 FMO1Q01740 532 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 FSTL1Q12841 308 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 PGM5Q15124 567 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 SNCBQ16143 134 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 AMHR2Q16671 573 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.31□□□□□ -0.12
GPC1-209ENST00000495100 MAD1L1Q9Y6D9 718 aa14.31□□□□□ -0.12
GPC1-209ENST00000495100 ECM29Q5VYK3 1845 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 A0A0G2JND7 137 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 CCDC195A0A1B0GUA6 201 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 CCDC78A2IDD5 438 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 DNM1LO00429 736 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
GPC1-209ENST00000495100 WDR72Q3MJ13 1102 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 HYIQ5T013 277 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 GPD1LQ8N335 351 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 SEL1LQ9UBV2 794 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 FRMPD4Q14CM0 1322 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 F8VP50 259 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 ICAM1P05362 532 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 TNFSF9P41273 254 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 RNASELQ05823 741 aaKnown RBP14.3□□□□□ -0.12
GPC1-209ENST00000495100 PDIA2Q13087 525 aaKnown RBP14.3□□□□□ -0.12
GPC1-209ENST00000495100 DRP2Q13474 957 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 PALM2Q8IXS6 379 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 ZDHHC14Q8IZN3 488 aa14.3□□□□□ -0.12
GPC1-209ENST00000495100 NGRNQ9NPE2 291 aaKnown RBP14.3□□□□□ -0.12
GPC1-209ENST00000495100 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
GPC1-209ENST00000495100 ACTR2P61160 394 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 PPP2R5AQ15172 486 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 RFX6Q8HWS3 928 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 RBBP8NLQ8NC74 664 aaPredicted RBP14.29□□□□□ -0.12
GPC1-209ENST00000495100 UBA3Q8TBC4 463 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 N4BP2L2Q92802 583 aaPredicted RBP14.29□□□□□ -0.12
GPC1-209ENST00000495100 PITPNM3Q9BZ71 974 aa14.29□□□□□ -0.12
GPC1-209ENST00000495100 MARCOQ9UEW3 520 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms