RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
SAMM50-205ENST00000493621 POLR3CQ9BUI4 534 aaPredicted RBP13.59□□□□□ -0.23
SAMM50-205ENST00000493621 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
SAMM50-205ENST00000493621 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
SAMM50-205ENST00000493621 MRPS23Q9Y3D9 190 aaKnown RBP13.59□□□□□ -0.23
SAMM50-205ENST00000493621 TMEM189-UBE2V1I3L0A0 370 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 I3L4J1 428 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 CYP11B2P19099 503 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 TKTP29401 623 aaKnown RBP13.58□□□□□ -0.24
SAMM50-205ENST00000493621 RBM25P49756 843 aaKnown RBP13.58□□□□□ -0.24
SAMM50-205ENST00000493621 CSTF1Q05048 431 aaKnown RBP13.58□□□□□ -0.24
SAMM50-205ENST00000493621 PUM1Q14671 1186 aaKnown RBP eCLIP13.58□□□□□ -0.24
SAMM50-205ENST00000493621 ZNF528Q3MIS6 628 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 DCAF4L1Q3SXM0 396 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 TPRG1Q6ZUI0 275 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 MCRS1Q96EZ8 462 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 PPP1R10Q96QC0 940 aaKnown RBP13.58□□□□□ -0.24
SAMM50-205ENST00000493621 KIFC3Q9BVG8 833 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 OSBPL6Q9BZF3 934 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 POLD4Q9HCU8 107 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 FBXO4Q9UKT5 387 aa13.58□□□□□ -0.24
SAMM50-205ENST00000493621 CITO14578 2027 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 RHOP08100 348 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 RPA1P27694 616 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 BRCC3P46736 316 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 ANAPC15P60006 121 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 ZBTB41Q5SVQ8 909 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 NT5DC1Q5TFE4 455 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 ATF7IP2Q5U623 682 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 CD300LGQ6UXG3 332 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 RTL10Q7L3V2 364 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
SAMM50-205ENST00000493621 IFT74Q96LB3 600 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 UROC1Q96N76 676 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 PLA2G2FQ9BZM2 168 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 BACE2Q9Y5Z0 518 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 GPR179Q6PRD1 2367 aa13.57□□□□□ -0.24
SAMM50-205ENST00000493621 DNAH14Q0VDD8 3507 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 SPTLC1O15269 473 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 TRAPPC3O43617 180 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 ECI2O75521 394 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 OR52Z1P0C646 297 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 CEBPBP17676 345 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 TARSP26639 723 aaKnown RBP13.56□□□□□ -0.24
SAMM50-205ENST00000493621 MAGEA9P43362 315 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 EFNA5P52803 228 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 ZNF174Q15697 407 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 UPP1Q16831 310 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 RSPO4Q2I0M5 234 aaPredicted RBP13.56□□□□□ -0.24
SAMM50-205ENST00000493621 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 VARS2Q5ST30 1063 aaKnown RBP13.56□□□□□ -0.24
SAMM50-205ENST00000493621 C3orf58Q8NDZ4 430 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 ATRIPQ8WXE1 791 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 HEBP1Q9NRV9 189 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 DLL3Q9NYJ7 618 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 PCDHGA2Q9Y5H1 932 aa13.56□□□□□ -0.24
SAMM50-205ENST00000493621 PDCD11Q14690 1871 aaKnown RBP13.55□□□□□ -0.24
SAMM50-205ENST00000493621 TICRRQ7Z2Z1 1910 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 SMIM28A0A1B0GU29 152 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 LRG1P02750 347 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 PTPN2P17706 415 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 ELF1P32519 619 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 ARPP19P56211 112 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 ROR1Q01973 937 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 SOX4Q06945 474 aaPredicted RBP13.55□□□□□ -0.24
SAMM50-205ENST00000493621 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
SAMM50-205ENST00000493621 TANGO2Q6ICL3 276 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 POTEHQ6S545 545 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 TSSK4Q6SA08 328 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 APBB1IPQ7Z5R6 666 aaPredicted RBP13.55□□□□□ -0.24
SAMM50-205ENST00000493621 CEP120Q8N960 986 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 BORCS6Q96GS4 357 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 NELL2Q99435 816 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 ZSCAN32Q9NX65 697 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 GDE1Q9NZC3 331 aa13.55□□□□□ -0.24
SAMM50-205ENST00000493621 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 ARHGEF37A1IGU5 675 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 WDR27A2RRH5 827 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 K7ERI5 159 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 PRRG1O14668 218 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 NCAM2O15394 837 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 CCT6AP40227 531 aaKnown RBP13.54□□□□□ -0.24
SAMM50-205ENST00000493621 YARSP54577 528 aaKnown RBP13.54□□□□□ -0.24
SAMM50-205ENST00000493621 OSTNP61366 133 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 ECM1Q16610 540 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 ZNF852Q6ZMS4 543 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 ZNF461Q8TAF7 563 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 KIFAP3Q92845 792 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 ELSPBP1Q96BH3 223 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 CORO1BQ9BR76 489 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
SAMM50-205ENST00000493621 BHMT2Q9H2M3 363 aa13.54□□□□□ -0.24
SAMM50-205ENST00000493621 AVENQ9NQS1 362 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms