RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 RTP2Q5QGT7 225 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 ZBTB41Q5SVQ8 909 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 FAM171A1Q5VUB5 890 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 SHC4Q6S5L8 630 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 ALKAL1Q6UXT8 129 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 TMC5Q6UXY8 1006 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 ZPBP2Q6X784 338 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 PALB2Q86YC2 1186 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 SUSD6Q92537 303 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 C18orf25Q96B23 403 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 DNAJC19Q96DA6 116 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 SNX27Q96L92 541 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 FBXL18Q96ME1 805 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 FIZ1Q96SL8 496 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 IKZF4Q9H2S9 585 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 TOPORSQ9NS56 1045 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 CHST7Q9NS84 486 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 STK39Q9UEW8 545 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 PRKAG3Q9UGI9 489 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 SSX2IPQ9Y2D8 614 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 MORC2Q9Y6X9 1032 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 FAM86C2PA6NEL3 165 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 TULP1O00294 542 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 CUTAO60888 179 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 B3GAT3O94766 335 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 YEATS4O95619 227 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 CXCL8P10145 99 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 BRCC3P46736 316 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 ME1P48163 572 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 GTF2BQ00403 316 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 CBX2Q14781 532 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 UPP1Q16831 310 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 XKR4Q5GH76 650 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 HERC4Q5GLZ8 1057 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 AXDND1Q5T1B0 1012 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 CES5AQ6NT32 575 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 SLC39A4Q6P5W5 647 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 DCLRE1AQ6PJP8 1040 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 CD300LGQ6UXG3 332 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 ZNF720Q7Z2F6 126 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 PPFIBP1Q86W92 1011 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 C3orf58Q8NDZ4 430 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 DHX58Q96C10 678 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 SPATA32Q96LK8 384 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 MSTO1Q9BUK6 570 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 PHF7Q9BWX1 381 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 ADAM7Q9H2U9 754 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 MRPL44Q9H9J2 332 aaKnown RBP9.03□□□□□ -0.96
HDAC6-221ENST00000477561 RXFP1Q9HBX9 757 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 MAN1C1Q9NR34 630 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 LMBRD1Q9NUN5 540 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 PCDHA7Q9UN72 937 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 SF3B1O75533 1304 aaKnown RBP eCLIP9.03□□□□□ -0.961e-6■■■■■ 66.8
HDAC6-221ENST00000477561 MYH11P35749 1972 aa9.03□□□□□ -0.96
HDAC6-221ENST00000477561 GOLGA6L4A6NEF3 574 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 LACTBL1A8MY62 500 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 PI4K2BG5E9Z4 385 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 PODXLO00592 558 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 POLR2DO15514 142 aaKnown RBP9.02□□□□□ -0.97
HDAC6-221ENST00000477561 TGM5O43548 720 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 RFPL2O75678 378 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 GCNT3O95395 438 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 GLUD1P00367 558 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 ADH1AP07327 375 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 CLTAP09496 248 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 KCNE1P15382 129 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 UBE2HP62256 183 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 ITIH3Q06033 890 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 KCNA1Q09470 495 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
HDAC6-221ENST00000477561 E2F4Q16254 413 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 KLHL40Q2TBA0 621 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 RNF135Q8IUD6 432 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 MAP4K3Q8IVH8 894 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 LNX1Q8TBB1 728 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-221ENST00000477561 KCNG4Q8TDN1 519 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 HPS3Q969F9 1004 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 UROC1Q96N76 676 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 TTPALQ9BTX7 342 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 FGFBP2Q9BYJ0 223 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 POMKQ9H5K3 350 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 SLC38A7Q9NVC3 462 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 PANK4Q9NVE7 773 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 DZANK1Q9NVP4 752 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 TUBGCP4Q9UGJ1 667 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 MUTYHQ9UIF7 546 aa9.02□□□□□ -0.97
HDAC6-221ENST00000477561 A0A0B4J269 797 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 LOC730098B7Z3J9 87 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 OGTO15294 1046 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 ADAM12O43184 909 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 FAM189A1O60320 539 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 PIGRP01833 764 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 GAP43P17677 238 aa9.01□□□□□ -0.97
HDAC6-221ENST00000477561 TKTP29401 623 aaKnown RBP9.01□□□□□ -0.97
HDAC6-221ENST00000477561 CASP1P29466 404 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms