RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 C18orf25Q96B23 403 aaPredicted RBP12.81□□□□□ -0.36
VARS2-208ENST00000477052 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
VARS2-208ENST00000477052 RHOBTB2Q9BYZ6 727 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 TBC1D17Q9HA65 648 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
VARS2-208ENST00000477052 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.81□□□□□ -0.36
VARS2-208ENST00000477052 DNM3Q9UQ16 869 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 TNFSF13BQ9Y275 285 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 VPS13AQ96RL7 3174 aa12.81□□□□□ -0.36
VARS2-208ENST00000477052 PRR23AA6NEV1 266 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 ANHXE9PGG2 379 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 PAPLNO95428 1278 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 SRFP11831 508 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 MUTP22033 750 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 NUBP1P53384 320 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 GPC5P78333 572 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 UPP1Q16831 310 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 POTEHQ6S545 545 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.8□□□□□ -0.36
VARS2-208ENST00000477052 C1orf186Q6ZWK4 172 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 GPR65Q8IYL9 337 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 FGF13Q92913 245 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 PNMA5Q96PV4 448 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 KXD1Q9BQD3 176 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 FOXQ1Q9C009 403 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 IRF2BPLQ9H1B7 796 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 PTPRHQ9HD43 1115 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 KMT5AQ9NQR1 393 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.8□□□□□ -0.36
VARS2-208ENST00000477052 DNMT3BQ9UBC3 853 aaKnown RBP12.8□□□□□ -0.36
VARS2-208ENST00000477052 MTRRQ9UBK8 725 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 WNT16Q9UBV4 365 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 CDH7Q9ULB5 785 aa12.8□□□□□ -0.36
VARS2-208ENST00000477052 NRG2O14511 850 aaPredicted RBP12.79□□□□□ -0.36
VARS2-208ENST00000477052 ABLIM1O14639 778 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 NBL1P41271 181 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 GRM5P41594 1212 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 SPAG1Q07617 926 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 ELAVL2Q12926 359 aaKnown RBP12.79□□□□□ -0.36
VARS2-208ENST00000477052 DMP1Q13316 513 aaPredicted RBP12.79□□□□□ -0.36
VARS2-208ENST00000477052 RAB33AQ14088 237 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 ALKAL1Q6UXT8 129 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 SNX27Q96L92 541 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
VARS2-208ENST00000477052 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
VARS2-208ENST00000477052 ARHGAP28Q9P2N2 729 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 PHLPP2Q6ZVD8 1323 aa12.79□□□□□ -0.36
VARS2-208ENST00000477052 NOTCH4Q99466 2003 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 VWA3AA6NCI4 1184 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 PROB1E7EW31 1015 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 TMEM189-UBE2V1I3L0A0 370 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 PODXLO00592 558 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
VARS2-208ENST00000477052 HNRNPA1P09651 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
VARS2-208ENST00000477052 YARSP54577 528 aaKnown RBP12.78□□□□□ -0.36
VARS2-208ENST00000477052 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
VARS2-208ENST00000477052 SLC5A9Q2M3M2 681 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 RAB34Q9BZG1 259 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 ARHGEF3Q9NR81 526 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 R4GN57 208 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 PTPRZ1P23471 2315 aaPredicted RBP12.78□□□□□ -0.36
VARS2-208ENST00000477052 MYH15Q9Y2K3 1946 aa12.78□□□□□ -0.36
VARS2-208ENST00000477052 XYLBO75191 536 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 SEC24AO95486 1093 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 C1RP00736 705 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 GLULP15104 373 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 CD72P21854 359 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 PROZP22891 400 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 GJB2P29033 226 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 ATP2C1P98194 919 aaPredicted RBP12.77□□□□□ -0.37
VARS2-208ENST00000477052 ROR1Q01973 937 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.37
VARS2-208ENST00000477052 PABPC1LQ4VXU2 614 aaKnown RBP12.77□□□□□ -0.37
VARS2-208ENST00000477052 XKR4Q5GH76 650 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
VARS2-208ENST00000477052 MPZL3Q6UWV2 235 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 NPAS3Q8IXF0 933 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 LRRC15Q8TF66 581 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 NKD2Q969F2 451 aaPredicted RBP12.77□□□□□ -0.37
VARS2-208ENST00000477052 TCEAL4Q96EI5 215 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 UROC1Q96N76 676 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 ACAP3Q96P50 834 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 PLA2G2FQ9BZM2 168 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 HAPLN2Q9GZV7 340 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 TMEM134Q9H6X4 195 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 TUBGCP4Q9UGJ1 667 aa12.77□□□□□ -0.37
VARS2-208ENST00000477052 MTF2Q9Y483 593 aaPredicted RBP12.77□□□□□ -0.37
VARS2-208ENST00000477052 RIF1Q5UIP0 2472 aaKnown RBP12.77□□□□□ -0.37
VARS2-208ENST00000477052 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 236.5 ms