RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 DACT2Q5SW24 774 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 PDZD4Q76G19 769 aaPredicted RBP7.42□□□□□ -1.22
VPS50-212ENST00000476413 FRMD5Q7Z6J6 570 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 GPR135Q8IZ08 494 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 SLC35B2Q8TB61 432 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 PGBD4Q96DM1 585 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 IL17RAQ96F46 866 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 SGCZQ96LD1 299 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 MYD88Q99836 296 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 NLRC4Q9NPP4 1024 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 TPCN1Q9ULQ1 816 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 PRSS29PA6NIE9 313 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 CXorf49A8MYA2 514 aaPredicted RBP7.41□□□□□ -1.22
VPS50-212ENST00000476413 TBX3O15119 743 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 B4GALT4O60513 344 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 AHSGP02765 367 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 KITP10721 976 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 ZKSCAN1P17029 563 aaPredicted RBP7.41□□□□□ -1.22
VPS50-212ENST00000476413 SLC6A4P31645 630 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 LONRF3Q496Y0 759 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 SEM1Q6ZVN7 128 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 FAM186BQ8IYM0 893 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 SLC38A3Q99624 504 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 LRRC27Q9C0I9 530 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 C11orf54Q9H0W9 315 aaPredicted RBP7.41□□□□□ -1.22
VPS50-212ENST00000476413 MOCS1Q9NZB8 636 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 NCDNQ9UBB6 729 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 PUF60Q9UHX1 559 aaKnown RBP7.41□□□□□ -1.22
VPS50-212ENST00000476413 PCDHA6Q9UN73 950 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 RNF114Q9Y508 228 aa7.41□□□□□ -1.22
VPS50-212ENST00000476413 A0A1W2PPL8 197 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 UBE2QL1A1L167 161 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 RASA4BC9J798 803 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 IFRD1O00458 451 aaPredicted RBP7.4□□□□□ -1.22
VPS50-212ENST00000476413 GRM6O15303 877 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 TEX33O43247 280 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 RASA4O43374 803 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 MATN4O95460 622 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 SMARCA1P28370 1054 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 RAP1GAPP47736 663 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 ARFIP2P53365 341 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 DUSP8Q13202 625 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 IFIT5Q13325 482 aaKnown RBP7.4□□□□□ -1.22
VPS50-212ENST00000476413 EMC10Q5UCC4 262 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 ANKS6Q68DC2 871 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 TMEM151BQ8IW70 566 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 TNIP3Q96KP6 325 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 DPYSL5Q9BPU6 564 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 ADAM7Q9H2U9 754 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 SIDT1Q9NXL6 827 aaKnown RBP7.4□□□□□ -1.22
VPS50-212ENST00000476413 CPA4Q9UI42 421 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 PNPLA7Q6ZV29 1317 aa7.4□□□□□ -1.22
VPS50-212ENST00000476413 KPNA5O15131 536 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 RAP2AP10114 183 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 SLC7A1P30825 629 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 FMO1Q01740 532 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 FAM214AQ32MH5 1076 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 PABPC1LQ4VXU2 614 aaKnown RBP7.39□□□□□ -1.23
VPS50-212ENST00000476413 KHDC1LQ5JSQ8 128 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 SESTD1Q86VW0 696 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 SKAP1Q86WV1 359 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 SHCBP1Q8NEM2 672 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 IL17RDQ8NFM7 739 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 BRIX1Q8TDN6 353 aaKnown RBP7.39□□□□□ -1.23
VPS50-212ENST00000476413 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
VPS50-212ENST00000476413 CCDC138Q96M89 665 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 NDC1Q9BTX1 674 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 MRI1Q9BV20 369 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 PLCB1Q9NQ66 1216 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 STK32BQ9NY57 414 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.39□□□□□ -1.23
VPS50-212ENST00000476413 OAZ3Q9UMX2 235 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 CORO2BQ9UQ03 480 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 DMTF1Q9Y222 760 aa7.39□□□□□ -1.23
VPS50-212ENST00000476413 ABHD14A-ACY1A0A1B0GW23 586 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 RHPN2P1A8MT19 583 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 ISM1B1AKI9 464 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 HOXA3O43365 443 aaPredicted RBP7.38□□□□□ -1.23
VPS50-212ENST00000476413 NUAK1O60285 661 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 HDCP19113 662 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 EN2P19622 333 aaPredicted RBP7.38□□□□□ -1.23
VPS50-212ENST00000476413 PIK3CGP48736 1102 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 NPEPPSP55786 919 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 RAC3P60763 192 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 ZNF543Q08ER8 600 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 KIAA2012Q0VF49 1180 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 CNGA2Q16280 664 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 CSRP2Q16527 193 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 ZNF568Q3ZCX4 644 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 FAM83BQ5T0W9 1011 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 TCERG1LQ5VWI1 586 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 BORCS6Q96GS4 357 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 RIPOR3Q96MK2 946 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 P2RX7Q99572 595 aaKnown RBP7.38□□□□□ -1.23
VPS50-212ENST00000476413 TRIM54Q9BYV2 358 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 PTPRHQ9HD43 1115 aa7.38□□□□□ -1.23
VPS50-212ENST00000476413 SARS2Q9NP81 518 aaKnown RBP7.38□□□□□ -1.23
VPS50-212ENST00000476413 CPNE7Q9UBL6 633 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms