RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 PSMC3P17980 439 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ARF4P18085 180 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ADD1P35611 737 aaKnown RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 MBTD1Q05BQ5 628 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 PTGDRQ13258 359 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 DGKKQ5KSL6 1271 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 FAM171A1Q5VUB5 890 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 KRT25Q7Z3Z0 450 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 APBB1IPQ7Z5R6 666 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 WDR5BQ86VZ2 330 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 RAB11FIP4Q86YS3 637 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 SLFN12Q8IYM2 578 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ZNF461Q8TAF7 563 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 FAM3CQ92520 227 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ASB16Q96NS5 453 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 KXD1Q9BQD3 176 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 APOL6Q9BWW8 343 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 EIF2AQ9BY44 585 aaKnown RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 NXF3Q9H4D5 531 aaKnown RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ANO2Q9NQ90 1003 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 HEBP1Q9NRV9 189 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ANKEF1Q9NU02 776 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 PRMT7Q9NVM4 692 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 MIOSQ9NXC5 875 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 DNMT3BQ9UBC3 853 aaKnown RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 DDX25Q9UHL0 483 aaKnown RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 VAV3Q9UKW4 847 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 PCDHA4Q9UN74 947 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 COL4A2P08572 1712 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ARID2Q68CP9 1835 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 VWA8A3KMH1 1905 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 TMEM150BA6NC51 233 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 N4BP3O15049 544 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 CCL16O15467 120 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 LRG1P02750 347 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 CHRNB1P11230 501 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 RPL17P18621 184 aaKnown RBP7.53□□□□□ -1.2
SF3A3-205ENST00000470585 CD72P21854 359 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 FCARP24071 287 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 EPHA5P54756 1037 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 NPEPPSP55786 919 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 NLRP5P59047 1200 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 FGD1P98174 961 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 COL9A3Q14050 684 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-205ENST00000470585 NTRK3Q16288 839 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 PRSS36Q5K4E3 855 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 TPGS2Q68CL5 300 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 PLA2G4FQ68DD2 849 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 PRSS55Q6UWB4 352 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-205ENST00000470585 MFSD6LQ8IWD5 586 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 TCEAL8Q8IYN2 117 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 ELMOD1Q8N336 334 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 SMARCD2Q92925 531 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 KCNB2Q92953 911 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 TMEM143Q96AN5 459 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 DDX27Q96GQ7 796 aaKnown RBP7.53□□□□□ -1.2
SF3A3-205ENST00000470585 LXNQ9BS40 222 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 OXCT2Q9BYC2 517 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-205ENST00000470585 C2orf40Q9H1Z8 148 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 ZNF334Q9HCZ1 680 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-205ENST00000470585 OBP2AQ9NY56 170 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 POLIQ9UNA4 740 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 FLNBO75369 2602 aaKnown RBP7.53□□□□□ -1.2
SF3A3-205ENST00000470585 FRYQ5TBA9 3013 aa7.53□□□□□ -1.2
SF3A3-205ENST00000470585 F8W810 466 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 K7ESF4 209 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 ARNTLO00327 626 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 EML1O00423 815 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 SYN3O14994 580 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 CHADO15335 359 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 ABLIM3O94929 683 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 EPN2O95208 641 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 KIF4AO95239 1232 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 DEXIO95424 95 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 TDP2O95551 362 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 CHRM1P11229 460 aaPredicted RBP7.52□□□□□ -1.21
SF3A3-205ENST00000470585 ATF2P15336 505 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 WEE1P30291 646 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 ELF1P32519 619 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 OR1D2P34982 312 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 ARL2P36404 184 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 RAP1GAPP47736 663 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 NTHL1P78549 312 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 CAPSQ13938 189 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 NAB2Q15742 525 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 DCAF4L1Q3SXM0 396 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 AASDHQ4L235 1098 aaPredicted RBP7.52□□□□□ -1.21
SF3A3-205ENST00000470585 XKR9Q5GH70 373 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 N4BP2L1Q5TBK1 243 aaPredicted RBP7.52□□□□□ -1.21
SF3A3-205ENST00000470585 CYP4A22Q5TCH4 519 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 CDCA2Q69YH5 1023 aaPredicted RBP7.52□□□□□ -1.21
SF3A3-205ENST00000470585 TANGO2Q6ICL3 276 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 TSSK4Q6SA08 328 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 PRR23BQ6ZRT6 265 aa7.52□□□□□ -1.21
SF3A3-205ENST00000470585 RALGPS2Q86X27 583 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms