RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 AASDHQ4L235 1098 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 EXOSC6Q5RKV6 272 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 TTC39AQ5SRH9 613 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 RARS2Q5T160 578 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 SPOUT1Q5T280 376 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 PLPP4Q5VZY2 271 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 TMED8Q6PL24 325 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 LYPD4Q6UWN0 246 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 CCDC149Q6ZUS6 474 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 C12orf40Q86WS4 652 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 DMRTC2Q8IXT2 367 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 THNSL1Q8IYQ7 743 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 FMR1NBQ8N0W7 255 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 CELF5Q8N6W0 485 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 THAP3Q8WTV1 239 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 KLHL6Q8WZ60 621 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 NELL1Q92832 810 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 MAP4K1Q92918 833 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 GPATCH3Q96I76 525 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 USP26Q9BXU7 913 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 CRNKL1Q9BZJ0 848 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 EPN3Q9H201 632 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 ENTPD7Q9NQZ7 604 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 ZMYM5Q9UJ78 669 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 GOLGA4Q13439 2230 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 DOCK5Q9H7D0 1870 aa4.73□□□□□ -1.65
ECHDC1-211ENST00000460558 IL16Q14005 1332 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 FANCIQ9NVI1 1328 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 B4DLN1 442 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 CDC45O75419 566 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 FGF18O76093 207 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 F2P00734 622 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 GH1P01241 217 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 PGRP06401 933 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 UBTFL1P0CB47 393 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 STAG3L1P0CL83 205 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 SPINK2P20155 84 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 MRPL12P52815 198 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 PPP2R5EQ16537 467 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 LONRF2Q1L5Z9 754 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 COL28A1Q2UY09 1125 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 MTERF2Q49AM1 385 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 PAN2Q504Q3 1202 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 ARSHQ5FYA8 562 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 CCDC158Q5M9N0 1113 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 DCLRE1AQ6PJP8 1040 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 C19orf48Q6RUI8 117 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 SPATC1Q76KD6 591 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 RPAP2Q8IXW5 612 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 AMOTL1Q8IY63 956 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 TMEFF1Q8IYR6 380 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 C12orf50Q8NA57 414 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 SMG8Q8ND04 991 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 RNF214Q8ND24 703 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 UBASH3BQ8TF42 649 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 APPBP2Q92624 585 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 ATP6V0A1Q93050 837 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 DYNLL2Q96FJ2 89 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 BBC3Q96PG8 261 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 TCF25Q9BQ70 676 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 MYL10Q9BUA6 226 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 SCNM1Q9BWG6 230 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 LSM14BQ9BX40 385 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 FOXQ1Q9C009 403 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 NGRNQ9NPE2 291 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 DISC1Q9NRI5 854 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 FANCLQ9NW38 375 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 TJP2Q9UDY2 1190 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 PUF60Q9UHX1 559 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 HDAC5Q9UQL6 1122 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 LZTS1Q9Y250 596 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 PRKAB1Q9Y478 270 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 HCFC2Q9Y5Z7 792 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 LAMA4Q16363 1823 aa4.72□□□□□ -1.65
ECHDC1-211ENST00000460558 A0A0A0MRY4 1105 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 ESYT3A0FGR9 886 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 C17orf102A2RUQ5 167 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 PRAMEF27A3QJZ7 478 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 HIDE1A8MVS5 230 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 CHURC1-FNTBB4DL54 471 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 HAS3O00219 553 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 RGS13O14921 159 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 ARHGAP6O43182 974 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 LRRN2O75325 713 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 DDAH1O94760 285 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 CLSTN1O94985 981 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 WISP1O95388 367 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 TIAF1O95411 115 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 ZNF286BP0CG31 522 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 CYP2D6P10635 497 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 PLA2G2AP14555 144 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 NOVA1P51513 510 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 STAT2P52630 851 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 STARD6P59095 220 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 EXOSC9Q06265 439 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 ARHGAP1Q07960 439 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 IKQ13123 557 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 PTPN14Q15678 1187 aa4.71□□□□□ -1.66
ECHDC1-211ENST00000460558 MUM1L1Q5H9M0 696 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms