RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KCNE1P15382 129 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 KLK7P49862 253 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 TFAMQ00059 246 aaKnown RBP22.8■■□□□ 1.24
VPS13B-204ENST00000441350 TDRD10Q5VZ19 366 aaKnown RBP22.8■■□□□ 1.24
VPS13B-204ENST00000441350 TMC6Q7Z403 805 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 LMO3Q8TAP4 145 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 LPPQ93052 612 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 ZMAT2Q96NC0 199 aaKnown RBP22.8■■□□□ 1.24
VPS13B-204ENST00000441350 PPP1R9BQ96SB3 815 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 TSPAN18Q96SJ8 248 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 KLK14Q9P0G3 267 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 GCNT4Q9P109 453 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 GIT1Q9Y2X7 761 aa22.8■■□□□ 1.24
VPS13B-204ENST00000441350 EOMESO95936 686 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 PON1P27169 355 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 CCDC173Q0VFZ6 552 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 CETN1Q12798 172 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 TMEM132DQ14C87 1099 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 ZBTB6Q15916 424 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 DPY19L2P1Q6NXN4 242 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 DRC7Q8IY82 874 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 PGBD4Q96DM1 585 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 MTMR12Q9C0I1 747 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 CSF2RAP15509 400 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 SLC9A1P19634 815 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 TBX2Q13207 712 aaPredicted RBP22.79■■□□□ 1.24
VPS13B-204ENST00000441350 CNKSR3Q6P9H4 555 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 TRAPPC11Q7Z392 1133 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 TMEM199Q8N511 208 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 SPC24Q8NBT2 197 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 EHBP1Q8NDI1 1231 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 FBXL13Q8NEE6 735 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 TAS1R2Q8TE23 839 aa22.79■■□□□ 1.24
VPS13B-204ENST00000441350 CACTINQ8WUQ7 758 aaKnown RBP22.79■■□□□ 1.24
VPS13B-204ENST00000441350 SMIM28A0A1B0GU29 152 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 VNN1O95497 513 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 TRIM65Q6PJ69 517 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 GSTCDQ8NEC7 633 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 SEMA4DQ92854 862 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 KIF12Q96FN5 646 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 ANKRD36BP1Q96IX9 119 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 HTATIP2Q9BUP3 242 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 ELAC1Q9H777 363 aaKnown RBP22.78■■□□□ 1.24
VPS13B-204ENST00000441350 UBN1Q9NPG3 1134 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 PLCB1Q9NQ66 1216 aa22.78■■□□□ 1.24
VPS13B-204ENST00000441350 MICAL3Q7RTP6 2002 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.77■■□□□ 1.24
VPS13B-204ENST00000441350 PTGESO14684 152 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 TNNC2P02585 160 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 TMEM191BP0C7N4 346 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 BIRC3Q13489 604 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 FIGNQ5HY92 759 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 C7orf61Q8IZ16 206 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 RNF169Q8NCN4 708 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 PCMTD1Q96MG8 357 aaPredicted RBP22.77■■□□□ 1.24
VPS13B-204ENST00000441350 ZFP42Q96MM3 310 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 GAD1Q99259 594 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 LSM14BQ9BX40 385 aaKnown RBP22.77■■□□□ 1.24
VPS13B-204ENST00000441350 INTS2Q9H0H0 1204 aaKnown RBP22.77■■□□□ 1.24
VPS13B-204ENST00000441350 SIX2Q9NPC8 291 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 RAB20Q9NX57 234 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 IMPACTQ9P2X3 320 aa22.77■■□□□ 1.24
VPS13B-204ENST00000441350 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.77■■□□□ 1.246e-10■□□□□ 8.7
VPS13B-204ENST00000441350 TTC3P53804 2025 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 ARL5CA6NH57 179 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 CCDC85CA6NKD9 419 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 LRRN2O75325 713 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 NOL4O94818 638 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 HLA-DRAP01903 254 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 MLH1P40692 756 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 GLRA4Q5JXX5 417 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 CRIPAKQ8N1N5 446 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 CXorf38Q8TB03 319 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 NUP58Q9BVL2 599 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 TTYH3Q9C0H2 523 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 RSAD1Q9HA92 442 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 FAM207AQ9NSI2 230 aaPredicted RBP22.76■■□□□ 1.23
VPS13B-204ENST00000441350 TMEM161AQ9NX61 479 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 PRKAG2Q9UGJ0 569 aa22.76■■□□□ 1.23
VPS13B-204ENST00000441350 LTBP2Q14767 1821 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 EPHB6O15197 1021 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 INPPL1O15357 1258 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 PFKMP08237 780 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 ACTN1P12814 892 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 APBA1Q02410 837 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 IKBKEQ14164 716 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 SCARA3Q6AZY7 606 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 RPUSD2Q8IZ73 545 aaKnown RBP22.75■■□□□ 1.23
VPS13B-204ENST00000441350 C1orf127Q8N9H9 656 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 NEK11Q8NG66 645 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 PPP1R10Q96QC0 940 aaKnown RBP22.75■■□□□ 1.23
VPS13B-204ENST00000441350 GANQ9H2C0 597 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 SIX4Q9UIU6 781 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 PHACTR2O75167 634 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 GYPCP04921 128 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 AFF1P51825 1210 aaKnown RBP22.75■■□□□ 1.23
VPS13B-204ENST00000441350 NCOA4Q13772 614 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 TRIM14Q14142 442 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 KLHDC7AQ5VTJ3 777 aa22.75■■□□□ 1.23
VPS13B-204ENST00000441350 IQCDQ96DY2 449 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms