RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NRIP1P48552 1158 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 GTF2BQ00403 316 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 AMPD3Q01432 767 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 KCNA1Q09470 495 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 CUL4BQ13620 913 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 PLPP4Q5VZY2 271 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 LLGL2Q6P1M3 1020 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 MPZL3Q6UWV2 235 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 LYPD8Q6UX82 237 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 TAS1R1Q7RTX1 841 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 APBB1IPQ7Z5R6 666 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 ADGRD2Q7Z7M1 963 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 TMEM173Q86WV6 379 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 CCDC65Q8IXS2 484 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 COLGALT2Q8IYK4 626 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 CEP57L1Q8IYX8 460 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 SYCP3Q8IZU3 236 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 SLC39A11Q8N1S5 342 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 TMEM130Q8N3G9 435 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 NOC3LQ8WTT2 800 aaKnown RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 BCL7CQ8WUZ0 217 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 TMEM169Q96HH4 297 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 IGSF21Q96ID5 467 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 B3GALT6Q96L58 329 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 ACAP3Q96P50 834 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 TCF25Q9BQ70 676 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 PAAF1Q9BRP4 392 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 CCDC94Q9BW85 323 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 COLEC11Q9BWP8 271 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 FGFBP2Q9BYJ0 223 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 HAPLN2Q9GZV7 340 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 SCAND2PQ9GZW5 306 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 LMAN2LQ9H0V9 348 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 CDT1Q9H211 546 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 TLE6Q9H808 572 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 PTPRHQ9HD43 1115 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 ENTPD7Q9NQZ7 604 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 CLDND1Q9NY35 253 aa6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 MORC2Q9Y6X9 1032 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P24-201ENST00000433260 SMIM28A0A1B0GU29 152 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 C2CD2LO14523 706 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 ABLIM1O14639 778 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 PTGESO14684 152 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 HNRNPDLO14979 420 aaKnown RBP6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 TADA2AO75478 443 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 TOM1L1O75674 476 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 MCF2P10911 925 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 GAP43P17677 238 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 KCNA5P22460 613 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 GRM5P41594 1212 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 ACOT2P49753 483 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 KCNQ1P51787 676 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 CASP5P51878 434 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 NDUFA8P51970 172 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZNF131P52739 623 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 ASIC1P78348 528 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 PLCB3Q01970 1234 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 DLX2Q07687 328 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 HYAL1Q12794 435 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 CLUL1Q15846 466 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 PTPRNQ16849 979 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 DCAF4L1Q3SXM0 396 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZBTB41Q5SVQ8 909 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZPBP2Q6X784 338 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 DDX53Q86TM3 631 aaKnown RBP6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 CEP57Q86XR8 500 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 GLYCTKQ8IVS8 523 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 VPS52Q8N1B4 723 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 FSIP1Q8NA03 581 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 TMEM87AQ8NBN3 555 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 GLIS3Q8NEA6 775 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 HASPINQ8TF76 798 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZNF516Q92618 1163 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 PAGE5Q96GU1 130 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 FIZ1Q96SL8 496 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 C7orf25Q9BPX7 421 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 MSTO1Q9BUK6 570 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 APOL5Q9BWW9 433 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 TNMDQ9H2S6 317 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 GOLPH3LQ9H4A5 285 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 PCIF1Q9H4Z3 704 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 GOLGA2P5Q9HBQ8 144 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 SLC39A2Q9NP94 309 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 TLR9Q9NR96 1032 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 CITO14578 2027 aa6.3□□□□□ -1.4
HMGB3P24-201ENST00000433260 PRRC2BQ5JSZ5 2229 aaKnown RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 GOLGA8IPA6NC78 632 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 GOLGA8JA6NMD2 632 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 LACTBL1A8MY62 500 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 H3BQ06 376 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 FSCN2O14926 492 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 MEFVO15553 781 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZNF202O95125 648 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms