RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF185O15231 689 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 LPXNO60711 386 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 TOM1O60784 492 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 NCR1O76036 304 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 PRKD3O94806 890 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 NDUFA10O95299 355 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 SRSF2Q01130 221 aaKnown RBP6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 Q6ZVL8 140 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 TRMT2AQ8IZ69 625 aaKnown RBP6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 FBXO18Q8NFZ0 1043 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 OR7D4Q8NG98 312 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 WDR66Q8TBY9 1149 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 TEX101Q9BY14 249 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 GREM2Q9H772 168 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 BCO1Q9HAY6 547 aa6.65□□□□□ -1.34
HMGB3P5-201ENST00000428894 NCOA1Q15788 1441 aa6.65□□□□□ -1.35
HMGB3P5-201ENST00000428894 ZNF518AQ6AHZ1 1483 aa6.65□□□□□ -1.35
HMGB3P5-201ENST00000428894 C3P01024 1663 aa6.65□□□□□ -1.35
HMGB3P5-201ENST00000428894 GAGE12BA1L429 117 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 GAGE12HA6NDE8 117 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 CXorf49A8MYA2 514 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 GPR39O43194 453 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 GCP02774 474 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 VIL1P09327 827 aaKnown RBP6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 ECHS1P30084 290 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 GPR3P46089 330 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 PER3P56645 1201 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 CLRN1P58418 232 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 PDCD4Q53EL6 469 aaKnown RBP6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 MUM1L1Q5H9M0 696 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 ZNF572Q7Z3I7 529 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 SPATS2Q86XZ4 545 aaKnown RBP6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 PLXDC1Q8IUK5 500 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 UHRF1Q96T88 793 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 RBM12Q9NTZ6 932 aaKnown RBP6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 DNAJC28Q9NX36 388 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 ANKFY1Q9P2R3 1169 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 SCOCQ9UIL1 159 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 ZBTB21Q9ULJ3 1066 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 CNTLNQ9NXG0 1405 aa6.64□□□□□ -1.35
HMGB3P5-201ENST00000428894 TMEM200CA6NKL6 621 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 PJA2O43164 708 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 ANO4Q32M45 955 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 ATXN7L2Q5T6C5 722 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 FAM102AQ5T9C2 384 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 AFAP1Q8N556 730 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 ATL2Q8NHH9 583 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 COG1Q8WTW3 980 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 ZG16BQ96DA0 208 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 DMRT3Q9NQL9 472 aa6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 USP15Q9Y4E8 981 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P5-201ENST00000428894 MYO5CQ9NQX4 1742 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 COL4A3Q01955 1670 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 CAMSAP1Q5T5Y3 1602 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 REREQ9P2R6 1566 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 AGLP35573 1532 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 NPATQ14207 1427 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 ZNF335Q9H4Z2 1342 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 DRGXA6NNA5 263 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 B3GALT2O43825 422 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 SNRPA1P09661 255 aaKnown RBP6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 SPATA31D3P0C874 917 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 GSPT1P15170 499 aaKnown RBP6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 SREBF1P36956 1147 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 CHN2P52757 468 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 PPP3CAQ08209 521 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 SP140Q13342 867 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 NOMO1Q15155 1222 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 GJC2Q5T442 439 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 RNF219Q5W0B1 726 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 METRNLQ641Q3 311 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 SPATA31D4Q6ZUB0 917 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 PQLC1Q8N2U9 271 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 STON2Q8WXE9 905 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 ADI1Q9BV57 179 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 FAM126AQ9BYI3 521 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 CCM2LQ9NUG4 571 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 PRKAB1Q9Y478 270 aa6.62□□□□□ -1.35
HMGB3P5-201ENST00000428894 ATRNL1Q5VV63 1379 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 GRID2IPA4D2P6 1211 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 WNT10BO00744 389 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 RHOBTB3O94955 611 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 ALOX15P16050 662 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 PROZP22891 400 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 HSPA1LP34931 641 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 BMPR1AP36894 532 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 SLC5A3P53794 718 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 RAP2BP61225 183 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 MALLQ13021 153 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 BEAN1Q3B7T3 259 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 ARHGEF19Q8IW93 802 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 CPEB3Q8NE35 698 aaKnown RBP6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 GPR150Q8NGU9 434 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 WDR11Q9BZH6 1224 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 SERHL2Q9H4I8 314 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 LDAHQ9H6V9 325 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 CYP4F11Q9HBI6 524 aa6.61□□□□□ -1.35
HMGB3P5-201ENST00000428894 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms