RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 TMEM143Q96AN5 459 aa16.89■□□□□ 0.29
TVP23C-203ENST00000428082 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.29
TVP23C-203ENST00000428082 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
TVP23C-203ENST00000428082 KATNAL1Q9BW62 490 aa16.89■□□□□ 0.29
TVP23C-203ENST00000428082 PAK6Q9NQU5 681 aaPredicted RBP16.89■□□□□ 0.29
TVP23C-203ENST00000428082 SETD4Q9NVD3 440 aa16.89■□□□□ 0.29
TVP23C-203ENST00000428082 LARSQ9P2J5 1176 aaKnown RBP16.89■□□□□ 0.29
TVP23C-203ENST00000428082 COL1A2P08123 1366 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 IGKV6-21A0A0C4DH24 114 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 DDX3XO00571 662 aaKnown RBP eCLIP16.88■□□□□ 0.294e-6■■■■■ 27.3
TVP23C-203ENST00000428082 CEP104O60308 925 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 EVI5O60447 810 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 C22orf31O95567 290 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 CCL5P13501 91 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 KCNA1Q09470 495 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 DRP2Q13474 957 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 MARCH8Q5T0T0 291 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 LRRC31Q6UY01 552 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 SLC17A8Q8NDX2 589 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 SLC30A5Q8TAD4 765 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 FIZ1Q96SL8 496 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 POLR3FQ9H1D9 316 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 ISCUQ9H1K1 167 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 DNAJC12Q9UKB3 198 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 AMFRQ9UKV5 643 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 TRIP12Q14669 1992 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 NCANO14594 1321 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 TMCO5BA8MYB1 307 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 EXOC3O60645 756 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 DNA2P51530 1060 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 MYL7Q01449 175 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 HIC1Q14526 733 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 INTS8Q75QN2 995 aaKnown RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 RASGEF1CQ8N431 466 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 CCDC26Q8TAB7 109 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 IFT81Q8WYA0 676 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 CTNNBL1Q8WYA6 563 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 BSNDQ8WZ55 320 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 RNF208Q9H0X6 261 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 SLITRK6Q9H5Y7 841 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 APEX2Q9UBZ4 518 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 NFU1Q9UMS0 254 aa16.88■□□□□ 0.29
TVP23C-203ENST00000428082 PACSIN2Q9UNF0 486 aaPredicted RBP16.88■□□□□ 0.29
TVP23C-203ENST00000428082 PLS3P13797 630 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 CARSP49589 748 aaKnown RBP16.87■□□□□ 0.29
TVP23C-203ENST00000428082 BFSP1Q12934 665 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 DRAP1Q14919 205 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-203ENST00000428082 MAATS1Q7Z4T9 603 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 RFFLQ8WZ73 363 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 LRRC45Q96CN5 670 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 DEFB118Q96PH6 123 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 NAP1L3Q99457 506 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-203ENST00000428082 STRA6Q9BX79 667 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 FAM107BQ9H098 131 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 INTS2Q9H0H0 1204 aaKnown RBP16.87■□□□□ 0.29
TVP23C-203ENST00000428082 TTC7AQ9ULT0 858 aaPredicted RBP16.87■□□□□ 0.29
TVP23C-203ENST00000428082 STXBP5LQ9Y2K9 1186 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 DNAH12Q6ZR08 3092 aa16.87■□□□□ 0.29
TVP23C-203ENST00000428082 NRCAMQ92823 1304 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 MAPK13O15264 365 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 PPP1R37O75864 691 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 ARL2P36404 184 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 CYP2J2P51589 502 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 PEX3P56589 373 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 SKOR1P84550 965 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 PKN2Q16513 984 aaKnown RBP16.86■□□□□ 0.29
TVP23C-203ENST00000428082 NBPF20Q3BBV1 942 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 EFCAB12Q6NXP0 572 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 MTHFD1LQ6UB35 978 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 DAAM2Q86T65 1068 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 EXOC8Q8IYI6 725 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 METTL13Q8N6R0 699 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 TSEN2Q8NCE0 465 aaKnown RBP16.86■□□□□ 0.29
TVP23C-203ENST00000428082 ASAP3Q8TDY4 903 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 CASKIN2Q8WXE0 1202 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 ACCSQ96QU6 501 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 CAPS2Q9BXY5 557 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 RRN3P2A6NIE6 340 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 RAD51CO43502 376 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 TNFAIP3P21580 790 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 CLCN3P51790 818 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 ACLYP53396 1101 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 GALCP54803 685 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 LRIG3Q6UXM1 1119 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 KLHL7Q8IXQ5 586 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 IQCKQ8N0W5 287 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 C7orf31Q8N865 590 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 ZNF333Q96JL9 665 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 ZIM3Q96PE6 472 aa16.86■□□□□ 0.29
TVP23C-203ENST00000428082 MAGEB2O15479 319 aa16.85■□□□□ 0.29
TVP23C-203ENST00000428082 GAS2O43903 313 aaKnown RBP16.85■□□□□ 0.29
TVP23C-203ENST00000428082 GLRA2P23416 452 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms