RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 IER5LQ5T953 404 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 LIN9Q5TKA1 542 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 FAM173BQ6P4H8 233 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 PDXDC1Q6P996 788 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 ALKAL1Q6UXT8 129 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 CYP26C1Q6V0L0 522 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
NUP50-206ENST00000422489 HAUS6Q7Z4H7 955 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 GPR65Q8IYL9 337 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 PIK3R5Q8WYR1 880 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 RAD54LQ92698 747 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 C18orf25Q96B23 403 aaPredicted RBP10.16□□□□□ -0.78
NUP50-206ENST00000422489 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
NUP50-206ENST00000422489 EPSTI1Q96J88 318 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 PRKD2Q9BZL6 878 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 WDR6Q9NNW5 1121 aaKnown RBP10.16□□□□□ -0.78
NUP50-206ENST00000422489 SLC38A7Q9NVC3 462 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 KCND2Q9NZV8 630 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 NUB1Q9Y5A7 615 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 H0YCG3 227 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 STK25O00506 426 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 PODXLO00592 558 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 SLC26A4O43511 780 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 C1RP00736 705 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 KCNE1P15382 129 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 FGFR3P22607 806 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 PROZP22891 400 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 TKTP29401 623 aaKnown RBP10.15□□□□□ -0.78
NUP50-206ENST00000422489 DDIT3P35638 169 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 LIG4P49917 911 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 NCKAP1LP55160 1127 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 SOX4Q06945 474 aaPredicted RBP10.15□□□□□ -0.78
NUP50-206ENST00000422489 TDGQ13569 410 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 XKR4Q5GH76 650 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 PPM1LQ5SGD2 360 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 CD300LGQ6UXG3 332 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 ZPBP2Q6X784 338 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 USP49Q70CQ1 688 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 GRASPQ7Z6J2 395 aaPredicted RBP10.15□□□□□ -0.78
NUP50-206ENST00000422489 ST13P5Q8NFI4 369 aaPredicted RBP10.15□□□□□ -0.78
NUP50-206ENST00000422489 RSAD2Q8WXG1 361 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 STAMQ92783 540 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 ZNF707Q96C28 371 aaPredicted RBP10.15□□□□□ -0.78
NUP50-206ENST00000422489 FAM212AQ96EL1 285 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 ASIC4Q96FT7 647 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 SNX27Q96L92 541 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 ZMAT2Q96NC0 199 aaKnown RBP10.15□□□□□ -0.78
NUP50-206ENST00000422489 REEP2Q9BRK0 252 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 PANK2Q9BZ23 570 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 MFSD1Q9H3U5 465 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 PARVGQ9HBI0 331 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 BLOC1S4Q9NUP1 217 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 ZDHHC7Q9NXF8 308 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 CCDC39Q9UFE4 941 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 ODF2LQ9ULJ1 636 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 CDY1Q9Y6F8 540 aa10.15□□□□□ -0.78
NUP50-206ENST00000422489 CLUHO75153 1309 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 TMEM189-UBE2V1I3L0A0 370 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 K7ENM7 598 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 ABLIM1O14639 778 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 CCL16O15467 120 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 TRAK2O60296 914 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 TBCAO75347 108 aaKnown RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 C8AP07357 584 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 CLTAP09496 248 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 FSHRP23945 695 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 NMT1P30419 496 aaKnown RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 AVPR2P30518 371 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 RPL9P32969 192 aaKnown RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 VCPP55072 806 aaKnown RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 NTHL1P78549 312 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 MCL1Q07820 350 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 RESTQ13127 1097 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 RAB33AQ14088 237 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 NOLC1Q14978 699 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP50-206ENST00000422489 SLC10A6Q3KNW5 377 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 RRAGBQ5VZM2 374 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 RSPO2Q6UXX9 243 aaPredicted RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 ANKS3Q6ZW76 656 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 GET4Q7L5D6 327 aaPredicted RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 DYMQ7RTS9 669 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 ALYREFQ86V81 257 aaKnown RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 LRRC15Q8TF66 581 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 LARP4BQ92615 738 aaKnown RBP10.14□□□□□ -0.79
NUP50-206ENST00000422489 CLIC6Q96NY7 704 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 MYADMQ96S97 322 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 KCNH6Q9H252 994 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 FBXL21Q9UKT6 434 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 TBX20Q9UMR3 447 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 ARID2Q68CP9 1835 aa10.14□□□□□ -0.79
NUP50-206ENST00000422489 LACTBL1A8MY62 500 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 H7C4K7 107 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 MEFVO15553 781 aaPredicted RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 N4BP1O75113 896 aaKnown RBP10.13□□□□□ -0.79
NUP50-206ENST00000422489 XYLBO75191 536 aa10.13□□□□□ -0.79
NUP50-206ENST00000422489 HNRNPA1P09651 372 aaKnown RBP eCLIP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms