RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 CCDC112Q8NEF3 446 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.14□□□□□ -1.27
CLIP4-205ENST00000415891 HSPH1Q92598 858 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 PRICKLE1Q96MT3 831 aaPredicted RBP7.14□□□□□ -1.27
CLIP4-205ENST00000415891 PPP1R10Q96QC0 940 aaKnown RBP7.14□□□□□ -1.27
CLIP4-205ENST00000415891 TRIM62Q9BVG3 475 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 KRT23Q9C075 422 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 XKR8Q9H6D3 395 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 CNGB3Q9NQW8 809 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 IFT80Q9P2H3 777 aaPredicted RBP7.14□□□□□ -1.27
CLIP4-205ENST00000415891 TRIM10Q9UDY6 481 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 SRP68Q9UHB9 627 aaKnown RBP7.14□□□□□ -1.27
CLIP4-205ENST00000415891 DNAI1Q9UI46 699 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 MOSPD1Q9UJG1 213 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 PCOLCE2Q9UKZ9 415 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 ABCC8Q09428 1581 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 MRC2Q9UBG0 1479 aa7.14□□□□□ -1.27
CLIP4-205ENST00000415891 KIF7Q2M1P5 1343 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 A0A087X0B3 334 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SH3D21A4FU49 640 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 RRN3P2A6NIE6 340 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SNPHO15079 494 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 AXIN1O15169 862 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ZSCAN12O43309 604 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 RFPL1O75677 317 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SURF6O75683 361 aaKnown RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ABLIM3O94929 683 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 RARBP10826 455 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CHRNB1P11230 501 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ATP4AP20648 1035 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 MAPK3P27361 379 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 AFF1P51825 1210 aaKnown RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 YARSP54577 528 aaKnown RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 GSDMDP57764 484 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 S100A12P80511 92 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ENPEPQ07075 957 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 GOLGA8FQ08AF8 430 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 GOLGA8DPQ0D2H9 430 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 C17orf67Q0P5P2 114 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ASPHQ12797 758 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ERV3-1Q14264 604 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 HIC1Q14526 733 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 MFSD10Q14728 455 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SF3B4Q15427 424 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CLVS2Q5SYC1 327 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 C20orf194Q5TEA3 1177 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SPECC1LQ69YQ0 1117 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 TXNDC11Q6PKC3 985 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 NLRC3Q7RTR2 1065 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 COMTD1Q86VU5 262 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CLVS1Q8IUQ0 354 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 PASD1Q8IV76 773 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 DNAAF3Q8N9W5 541 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ST13P5Q8NFI4 369 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 WDR60Q8WVS4 1066 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CCDC127Q96BQ5 260 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 VCPIP1Q96JH7 1222 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 EXOC2Q96KP1 924 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ZDHHC15Q96MV8 337 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SLC2A13Q96QE2 648 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 STK33Q9BYT3 514 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 RHBGQ9H310 441 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 TMEM206Q9H813 350 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 FANCEQ9HB96 536 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 MRPL40Q9NQ50 206 aaKnown RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 EXTL2Q9UBQ6 330 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ANGPTL2Q9UKU9 493 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 VAV3Q9UKW4 847 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 TSC22D4Q9Y3Q8 395 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 USP16Q9Y5T5 823 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CCDC88BA6NC98 1476 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 MACROD2A1Z1Q3 448 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 TLR2O60603 784 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 KERAO60938 352 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SSBP05455 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 POLBP06746 335 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 APEHP13798 732 aaKnown RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CPA1P15085 419 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 PTPN2P17706 415 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ATF6P18850 670 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 RXRAP19793 462 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CPT1AP50416 773 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 FMR1Q06787 632 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 LEXMQ3ZCV2 418 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CFAP100Q494V2 611 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 RTP2Q5QGT7 225 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 FOXR1Q6PIV2 292 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ERICH1Q86X53 443 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 ALDH16A1Q8IZ83 802 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CARFQ8N187 725 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CEP112Q8N8E3 955 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 OR7G1Q8NGA0 311 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 GRK7Q8WTQ7 553 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 CENPIQ92674 756 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 UPF1Q92900 1129 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 TMA16Q96EY4 203 aaKnown RBP7.13□□□□□ -1.27
CLIP4-205ENST00000415891 NT5C1BQ96P26 610 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SLC4A9Q96Q91 983 aa7.13□□□□□ -1.27
CLIP4-205ENST00000415891 SELENOSQ9BQE4 189 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms