RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CDCA5Q96FF9 252 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 MSTO1Q9BUK6 570 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 TRIM31Q9BZY9 425 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 CARD9Q9H257 536 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 DPH5Q9H2P9 285 aa16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 TAF1DQ9H5J8 278 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-202ENST00000409472 A0A087WUV0 522 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.23e-7■■□□□ 12
SCAMP4-202ENST00000409472 PIK3CAP42336 1068 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 CLDN10P78369 228 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 BIRC3Q13489 604 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 SH2D3CQ8N5H7 860 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 GLG1Q92896 1179 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 ZSWIM1Q9BR11 485 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 C1orf112Q9NSG2 853 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 RBPJLQ9UBG7 517 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 ADGRA2Q96PE1 1338 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 ZBTB42B2RXF5 422 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 GZMAP12544 262 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 GCNT1Q02742 428 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 PRPF31Q8WWY3 499 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 VTI1AQ96AJ9 217 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 TTC7AQ9ULT0 858 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-202ENST00000409472 CENPFP49454 3210 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 A0A0B4J269 797 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 CCDC188H7C350 402 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 CYP1A2P05177 515 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 IREB2P48200 963 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 PEX5P50542 639 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 NNTQ13423 1086 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 UAP1Q16222 522 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 DNAJC21Q5F1R6 531 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 METTL7BQ6UX53 244 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 ZBTB33Q86T24 672 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 IQCKQ8N0W5 287 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 TMEM130Q8N3G9 435 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 ATP8B4Q8TF62 1192 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 CPA5Q8WXQ8 436 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 CD101Q93033 1021 aa16.27■□□□□ 0.2
SCAMP4-202ENST00000409472 CNTNAP2Q9UHC6 1331 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 MGAMO43451 1857 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 GOLGA6CA6NDK9 693 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 PIGRP01833 764 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 GOLGA6DP0CG33 693 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 TCEAL1Q15170 157 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 CLEC16AQ2KHT3 1053 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 WDR78Q5VTH9 848 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 KCTD16Q68DU8 428 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 FOXR1Q6PIV2 292 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 PASD1Q8IV76 773 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 C18orf8Q96DM3 657 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 TACO1Q9BSH4 297 aaKnown RBP16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 GOLGA6AQ9NYA3 693 aa16.27■□□□□ 0.19
SCAMP4-202ENST00000409472 SPDYE5A6NIY4 337 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 HSF2BPO75031 334 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 MTA2O94776 668 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 PYGMP11217 842 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 ACO1P21399 889 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 PTENP60484 403 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 ERO1BQ86YB8 467 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 OR2W6PQ8NHA6 318 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 GPR20Q99678 358 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 GTF3C4Q9UKN8 822 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 H0YCG3 227 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 FAM189A1O60320 539 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 MAFO75444 373 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 UNGP13051 313 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 GJA5P36382 358 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 GJC2Q5T442 439 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 TTC27Q6P3X3 843 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 USP37Q86T82 979 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 CDR2LQ86X02 465 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 MREGQ8N565 214 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 OPTNQ96CV9 577 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 SLITRK6Q9H5Y7 841 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 LRRC4CQ9HCJ2 640 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 PDGFCQ9NRA1 345 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 CNOT8Q9UFF9 292 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 NUB1Q9Y5A7 615 aa16.26■□□□□ 0.19
SCAMP4-202ENST00000409472 ADCY3O60266 1144 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 CLSTN1O94985 981 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 SRGAP2CP0DJJ0 459 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 NEDD9Q14511 834 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 C9orf131Q5VYM1 1079 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 TTC19Q6DKK2 380 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 ACAD10Q6JQN1 1059 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 PRELID2Q8N945 189 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 WHAMMQ8TF30 809 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 SEPT1Q8WYJ6 367 aa16.25■□□□□ 0.19
SCAMP4-202ENST00000409472 MSCO60682 206 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 PPFIA4O75335 1185 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 RRM1P23921 792 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 HSD17B3P37058 310 aa16.24■□□□□ 0.19
SCAMP4-202ENST00000409472 HSPA9P38646 679 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms