RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 CARSP49589 748 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 PRAMEP78395 509 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 MTF1Q14872 753 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ARHGEF6Q15052 776 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 FASTKD1Q53R41 847 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 ZC3H12BQ5HYM0 836 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 RMDN1Q96DB5 314 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 APOL6Q9BWW8 343 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 KANSL1LA0AUZ9 987 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 TRIM66O15016 1216 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ALDH18A1P54886 795 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 NPEPPSP55786 919 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 KDSRQ06136 332 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 KRT72Q14CN4 511 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 STXBP2Q15833 593 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 JAMLQ86YT9 394 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 CALML6Q8TD86 181 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 FAR2Q96K12 515 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 RBM12Q9NTZ6 932 aaKnown RBP10.08□□□□□ -0.8
SNX1-202ENST00000380285 PNMA3Q9UL41 463 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
SNX1-202ENST00000380285 SERPINB3P29508 390 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 SLC44A4Q53GD3 710 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 C1orf54Q8WWF1 131 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 DYNLL2Q96FJ2 89 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 CNBD2Q96M20 576 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 FRMPD1Q5SYB0 1578 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 GHRP10912 638 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 UCHL3P15374 230 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 CDH6P55285 790 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 DAB2P98082 770 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 CDC42EP1Q00587 391 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 RUNX1T1Q06455 604 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ILF2Q12905 390 aaKnown RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 EPHA7Q15375 998 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 CHP1Q99653 195 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 PABPC3Q9H361 631 aaKnown RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 SCN3BQ9NY72 215 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ZBTB1Q9Y2K1 713 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 PI4K2BG5E9Z4 385 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 C4BPBP20851 252 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 SPRP35270 261 aaPredicted RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 FIGNQ5HY92 759 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 MANSC1Q9H8J5 431 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ZCCHC11Q5TAX3 1644 aaKnown RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 IGF2BP3O00425 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
SNX1-202ENST00000380285 FMO5P49326 533 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 UBXN2AP68543 259 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ZNF568Q3ZCX4 644 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ERFEQ4G0M1 354 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 DSTYKQ6XUX3 929 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 RAPGEF5Q92565 580 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ANKS1AQ92625 1134 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 EIF2AK1Q9BQI3 630 aaKnown RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 DCP1AQ9NPI6 582 aaPredicted RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 WHRNQ9P202 907 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 TRPC5OSA6NMA1 111 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 PHF20L1A8MW92 1017 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 GYPCP04921 128 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 GALCP54803 685 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 TSPY1Q01534 308 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 KCNV1Q6PIU1 500 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 FAM213AQ9BRX8 229 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ZC3H7BQ9UGR2 993 aaKnown RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 USP17L5A8MUK1 530 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 SUPT3HO75486 399 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 NQO1P15559 274 aaKnown RBP10.07□□□□□ -0.8
SNX1-202ENST00000380285 HSD17B4P51659 736 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 SLC10A5Q5PT55 438 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 EXT2Q93063 718 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 CCT7Q99832 543 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 ABCC3O15438 1527 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 M0QYV0 167 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 RAD51CO43502 376 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 WDR47O94967 919 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 POU5F1BQ06416 359 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 JADE3Q92613 823 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 CAVIN3Q969G5 261 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 POLE3Q9NRF9 147 aa10.07□□□□□ -0.8
SNX1-202ENST00000380285 MROH7-TTC4A0A0A0MT08 1334 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 SRP72O76094 671 aaKnown RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 MYL2P10916 166 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 CYTH1Q15438 398 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 FAM102AQ5T9C2 384 aaPredicted RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 PI16Q6UXB8 463 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 NSUN6Q8TEA1 469 aaKnown RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 PARD3BQ8TEW8 1205 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 ZNF560Q96MR9 790 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 FUT8Q9BYC5 575 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 RBAKQ9NYW8 714 aaPredicted RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 ZNF185O15231 689 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 CCNJLQ8IV13 435 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms