RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ACTN1P12814 892 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 SLC5A2P31639 672 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 SERPINB8P50452 374 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 SFT2D3Q587I9 215 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 RBM26Q5T8P6 1007 aaKnown RBP10.15□□□□□ -0.78
SF3A3-201ENST00000373019 CEP70Q8NHQ1 597 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 RASGRP4Q8TDF6 673 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 MAGEF1Q9HAY2 307 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 CROTQ9UKG9 612 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 ZNF148Q9UQR1 794 aa10.15□□□□□ -0.78
SF3A3-201ENST00000373019 F8W8V4 182 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 PDGFRBP09619 1106 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CTNNA2P26232 953 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 RXRGP48443 463 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 RAP1GDS1P52306 607 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 RELAQ04206 551 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 DLG1Q12959 904 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 KYNUQ16719 465 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 MAP7D1Q3KQU3 841 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 THOC7Q6I9Y2 204 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CCDC174Q6PII3 467 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 RNF111Q6ZNA4 994 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 KSR1Q8IVT5 923 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CTNNBL1Q8WYA6 563 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 PANX3Q96QZ0 392 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 POP1Q99575 1024 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 ARHGEF4Q9NR80 690 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 DIS3Q9Y2L1 958 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 COL4A3BPQ9Y5P4 624 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 IGSF9BQ9UPX0 1349 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 ZWINTO95229 277 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 FGFR1OPO95684 399 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 TTC4O95801 387 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CHRNA3P32297 505 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 MED21Q13503 144 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CTTNQ14247 550 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 LRRC41Q15345 812 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 PDK4Q16654 411 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CCDC137Q6PK04 289 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 TMTC3Q6ZXV5 915 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 PRUNE1Q86TP1 453 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CABP7Q86V35 215 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 OR6Y1Q8NGX8 325 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 SLC35G2Q8TBE7 412 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 TEKT1Q969V4 418 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 MCUR1Q96AQ8 359 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 SENP6Q9GZR1 1112 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 ARMT1Q9H993 441 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 UTP6Q9NYH9 597 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 NUB1Q9Y5A7 615 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 ACTL7BQ9Y614 415 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 GNPATO15228 680 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 ADAM23O75077 832 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 SPAG7O75391 227 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 PDE5AO76074 875 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 SNRPA1P09661 255 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 RARBP10826 455 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 NFKBIAP25963 317 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 CCR3P51677 355 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 NADK2Q4G0N4 442 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 RHBDF2Q6PJF5 856 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 TRIM59Q8IWR1 403 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 NSL1Q96IY1 281 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 UBA5Q9GZZ9 404 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 NPHS2Q9NP85 383 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 FAM32AQ9Y421 112 aaKnown RBP10.14□□□□□ -0.79
SF3A3-201ENST00000373019 KIF13BQ9NQT8 1826 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
SF3A3-201ENST00000373019 MYMKA6NI61 221 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 TMEM110-MUSTN1A8MSY1 372 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 M0R2N6 131 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 H2AFZP0C0S5 128 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 UQCRBP14927 111 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 VCLP18206 1134 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 PDE1BQ01064 536 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 ADRM1Q16186 407 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 PDCD4Q53EL6 469 aaKnown RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 FBXL19Q6PCT2 694 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 H2AFVQ71UI9 128 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 FAM186BQ8IYM0 893 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 ALDH16A1Q8IZ83 802 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 RFWD2Q8NHY2 731 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 FBXO27Q8NI29 283 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 MAML1Q92585 1016 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 ZNF496Q96IT1 587 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 TTC1Q99614 292 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 DNAJB4Q9UDY4 337 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 PTPN22Q9Y2R2 807 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 HEMK1Q9Y5R4 338 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 ADAMTS7Q9UKP4 1686 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 CASZ1Q86V15 1759 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 TCRBV7S2A1N4TA0A589 114 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 EIF3FO00303 357 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 FBP2O00757 339 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 IRS4O14654 1257 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 PRKCIP41743 596 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 GALCP54803 685 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 MYLK3Q32MK0 819 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 CYFIP1Q7L576 1253 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 VPS52Q8N1B4 723 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms