RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CCT8L2Q96SF2 557 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 STK33Q9BYT3 514 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CACNA1FO60840 1977 aa9.67□□□□□ -0.86
SMARCA1-202ENST00000371122 CFAP69A5D8W1 941 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 APRTP07741 180 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 BRD2P25440 801 aaKnown RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 SHMT1P34896 483 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 IREB2P48200 963 aaKnown RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 PPATQ06203 517 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 DDR1Q08345 913 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 PDCD6IPQ8WUM4 868 aaKnown RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 C4AP0C0L4 1744 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 C4BP0C0L5 1744 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 PPP1R37O75864 691 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 TJP3O95049 919 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 HLA-DRAP01903 254 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 NCOA4Q13772 614 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 NAB2Q15742 525 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 HHIPL2Q6UWX4 724 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 GSDMBQ8TAX9 411 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 TAS1R2Q8TE23 839 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 CASKIN2Q8WXE0 1202 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 HVCN1Q96D96 273 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 ERGIC2Q96RQ1 377 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 BLOC1S4Q9NUP1 217 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 USH1CQ9Y6N9 552 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 A8MXQ7 604 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 MIF4GDA9UHW6 222 aaKnown RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FOXP2O15409 715 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 DYNC1LI2O43237 492 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 ATP9BO43861 1147 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 TRPA1O75762 1119 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 PDHA1P08559 390 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM153BP0C7A2 387 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 H2AFXP16104 143 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 GPC3P51654 580 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 CCNA1P78396 465 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 MYO1EQ12965 1108 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM153CQ494X1 144 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 DAB2IPQ5VWQ8 1189 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 RSBN1LQ6PCB5 846 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 CCDC117Q8IWD4 279 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 ZSWIM2Q8NEG5 633 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 SHCBP1LQ9BZQ2 653 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 ANKZF1Q9H8Y5 726 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 KLK14Q9P0G3 267 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 KLHL8Q9P2G9 620 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM153AQ9UHL3 310 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 L1RE1Q9UN81 338 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 SSU72P8A0A1W2PR75 194 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 PODXLO00592 558 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 PEX10O60683 326 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 CHN1P15882 459 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.861e-7■■■□□ 14.9
SMARCA1-202ENST00000371122 BCAR1P56945 870 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 P3H1Q32P28 736 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 MMEL1Q495T6 779 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM182AQ5T1J6 154 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 SLFN12LQ6IEE8 588 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 CENPPQ6IPU0 288 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 CEP128Q6ZU80 1094 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 JAMLQ86YT9 394 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FBXO25Q8TCJ0 367 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 TGS1Q96RS0 853 aaKnown RBP9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 MXRA8Q9BRK3 442 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 TACC3Q9Y6A5 838 aa9.66□□□□□ -0.86
SMARCA1-202ENST00000371122 ITIH6Q6UXX5 1313 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 ESRRAP11474 423 aaPredicted RBP9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 KRT3P12035 628 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 OSBPP22059 807 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 SARSP49591 514 aaKnown RBP9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 CLCN3P51790 818 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 IL1RL1Q01638 556 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 LMNB2Q03252 620 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 ASPHQ12797 758 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 DUOXA2Q1HG44 320 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 LRRC36Q1X8D7 754 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 PAN2Q504Q3 1202 aaKnown RBP9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 ABI1Q8IZP0 508 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 SYT2Q8N9I0 419 aaPredicted RBP9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 BBOF1Q8ND07 529 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 USP33Q8TEY7 942 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 DEPDC1BQ8WUY9 529 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 CDKL2Q92772 493 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 TRIM11Q96F44 468 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 RBM15Q96T37 977 aaKnown RBP eCLIP9.65□□□□□ -0.861e-6■□□□□ 9.5
SMARCA1-202ENST00000371122 TEX13BQ9BXU2 312 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 C10orf88Q9H8K7 445 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 ZNF446Q9NWS9 450 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 SCN7AQ01118 1682 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 PITPNM2Q9BZ72 1349 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 RALAP11233 206 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 GTF2H1P32780 548 aa9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 NOP14P78316 857 aaKnown RBP9.65□□□□□ -0.86
SMARCA1-202ENST00000371122 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms