RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 ARL4DP49703 201 aa10.42□□□□□ -0.74
SCAF11-202ENST00000369367 CDH6P55285 790 aa10.42□□□□□ -0.74
SCAF11-202ENST00000369367 ZNF280DQ6N043 979 aa10.42□□□□□ -0.74
SCAF11-202ENST00000369367 HOMEZQ8IX15 550 aa10.42□□□□□ -0.74
SCAF11-202ENST00000369367 HPDLQ96IR7 371 aa10.42□□□□□ -0.74
SCAF11-202ENST00000369367 RSRC1Q96IZ7 334 aaKnown RBP10.42□□□□□ -0.74
SCAF11-202ENST00000369367 RNASEH1O60930 286 aaKnown RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 RHOBTB3O94955 611 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 ACOT2P49753 483 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 ADCY2Q08462 1091 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 TMEM62Q0P6H9 643 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 CFAP36Q96G28 342 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 SPTLC3Q9NUV7 552 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 PCDHB2Q9Y5E7 798 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 LRRC53A6NM62 1247 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 H3BRB1 525 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 ATP8B1O43520 1251 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 FGGP02679 453 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 TUT1Q9H6E5 874 aaKnown RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 MAD2L2Q9UI95 211 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 FAM50BQ9Y247 325 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 EPHB3P54753 998 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 SP3Q02447 781 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 C6orf118Q5T5N4 469 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 TTC19Q6DKK2 380 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 C4orf22Q6V702 233 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 STOX1Q6ZVD7 989 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 CCDC124Q96CT7 223 aaKnown RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 PXMP2Q9NR77 195 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 FBXO28Q9NVF7 368 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 FBXO2Q9UK22 296 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 MAP2P11137 1827 aaKnown RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 C3orf70A6NLC5 250 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 AGPAT1Q99943 283 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 EMILIN2Q9BXX0 1053 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 STN1Q9H668 368 aaKnown RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 MSRAQ9UJ68 235 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 ALDH2P05091 517 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 THP07101 528 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 TRIM49P0CI25 452 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 TRIM49CP0CI26 452 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 FMO5P49326 533 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 AP1B1Q10567 949 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 DCLK2Q8N568 766 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 OLA1Q9NTK5 396 aaKnown RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 ORC6Q9Y5N6 252 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 PAX3P23760 479 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 CHRNA3P32297 505 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 LHX1P48742 406 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 PHEXP78562 749 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 TBCCQ15814 346 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 SNX19Q92543 992 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 ABHD10Q9NUJ1 306 aa10.41□□□□□ -0.74
SCAF11-202ENST00000369367 PRG3Q9Y2Y8 225 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-202ENST00000369367 MYPNQ86TC9 1320 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 SLC15A5A6NIM6 579 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 B3GAT3O94766 335 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 LRRC71Q8N4P6 559 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 ATPAF2Q8N5M1 289 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 ATP8B4Q8TF62 1192 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 MUC3BQ9H195 1237 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 PCSK1NQ9UHG2 260 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 RASGRF2O14827 1237 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 TRPA1O75762 1119 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 GTF2H1P32780 548 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 ERVK-9P63128 1117 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 ERVK-24P63145 666 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 DHX9Q08211 1270 aaKnown RBP10.4□□□□□ -0.74
SCAF11-202ENST00000369367 TROAPQ12815 778 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 SYT2Q8N9I0 419 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-202ENST00000369367 ASCC2Q9H1I8 757 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-202ENST00000369367 THG1LQ9NWX6 298 aaKnown RBP10.4□□□□□ -0.74
SCAF11-202ENST00000369367 ATP8A1Q9Y2Q0 1164 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 DNAJC6O75061 913 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 F9P00740 461 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 RCOR2Q8IZ40 523 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 GIPC2Q8TF65 315 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 KIF2CQ99661 725 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 DEUP1Q05D60 604 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 UGP2Q16851 508 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 PLA2G4FQ68DD2 849 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 MPZL3Q6UWV2 235 aa10.4□□□□□ -0.74
SCAF11-202ENST00000369367 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-202ENST00000369367 TRIM49BA6NDI0 452 aa10.4□□□□□ -0.75
SCAF11-202ENST00000369367 ESRRBO95718 433 aa10.4□□□□□ -0.75
SCAF11-202ENST00000369367 PDGFRAP16234 1089 aa10.4□□□□□ -0.75
SCAF11-202ENST00000369367 YWHAHQ04917 246 aaPredicted RBP10.4□□□□□ -0.75
SCAF11-202ENST00000369367 WASHC5Q12768 1159 aa10.4□□□□□ -0.75
SCAF11-202ENST00000369367 ZNF410Q86VK4 478 aa10.4□□□□□ -0.75
SCAF11-202ENST00000369367 ZNF557Q8N988 423 aaPredicted RBP10.4□□□□□ -0.75
SCAF11-202ENST00000369367 RBBP8NLQ8NC74 664 aaPredicted RBP10.4□□□□□ -0.75
SCAF11-202ENST00000369367 SLC7A14Q8TBB6 771 aa10.4□□□□□ -0.75
SCAF11-202ENST00000369367 TBX20Q9UMR3 447 aa10.4□□□□□ -0.75
SCAF11-202ENST00000369367 GRID2IPA4D2P6 1211 aa10.39□□□□□ -0.75
SCAF11-202ENST00000369367 PP2D1A8MPX8 630 aa10.39□□□□□ -0.75
SCAF11-202ENST00000369367 SMAPO00193 183 aa10.39□□□□□ -0.75
SCAF11-202ENST00000369367 CREMQ03060 361 aa10.39□□□□□ -0.75
SCAF11-202ENST00000369367 ADCY1Q08828 1119 aa10.39□□□□□ -0.75
SCAF11-202ENST00000369367 PCBP1Q15365 356 aaKnown RBP eCLIP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms