RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 DARSP14868 501 aaKnown RBP13.03□□□□□ -0.32
USF1-203ENST00000368021 ARF4P18085 180 aaPredicted RBP13.03□□□□□ -0.32
USF1-203ENST00000368021 CALRP27797 417 aaKnown RBP13.03□□□□□ -0.32
USF1-203ENST00000368021 AP3M2P53677 418 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 FAAP100Q0VG06 881 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 MTF1Q14872 753 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 C1orf53Q5VUE5 145 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 SV2AQ7L0J3 742 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 MNS1Q8NEH6 495 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 DNAJB3Q8WWF6 145 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 PPP1R13BQ96KQ4 1090 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 STK33Q9BYT3 514 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 CDT1Q9H211 546 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 TMEM39AQ9NV64 488 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 PAXBP1Q9Y5B6 917 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
USF1-203ENST00000368021 EPN1Q9Y6I3 576 aaPredicted RBP13.03□□□□□ -0.32
USF1-203ENST00000368021 TRIM43BA6NCK2 446 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 B4GALT4O60513 344 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 ZC3H11AO75152 810 aaKnown RBP eCLIP13.02□□□□□ -0.32
USF1-203ENST00000368021 NDUFA10O95299 355 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 SERPING1P05155 500 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 CLTBP09497 229 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 HARSP12081 509 aaKnown RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 TNNI1P19237 187 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 PSEN1P49768 467 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 ZNF200P98182 395 aaPredicted RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 ZACNQ401N2 412 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 EEF1DP3Q658K8 133 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 HGSNATQ68CP4 663 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 IQCEQ6IPM2 695 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 RPAINQ86UA6 219 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 NHEJ1Q9H9Q4 299 aaPredicted RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 RAB20Q9NX57 234 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 TRMT1Q9NXH9 659 aaKnown RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 ARHGAP20Q9P2F6 1191 aa13.02□□□□□ -0.32
USF1-203ENST00000368021 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.32
USF1-203ENST00000368021 CSDE1O75534 798 aaKnown RBP13.02□□□□□ -0.33
USF1-203ENST00000368021 C4BPAP04003 597 aaKnown RBP13.02□□□□□ -0.33
USF1-203ENST00000368021 TNFSF9P41273 254 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 CRYBB1P53674 252 aaPredicted RBP13.02□□□□□ -0.33
USF1-203ENST00000368021 WNT7BP56706 349 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 TMEM62Q0P6H9 643 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 RAPGEF1Q13905 1077 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 TEX35Q5T0J7 233 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 APBB1IPQ7Z5R6 666 aaPredicted RBP13.02□□□□□ -0.33
USF1-203ENST00000368021 WDR49Q8IV35 697 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 REXO1L1PQ8IX06 675 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 FAM126BQ8IXS8 530 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 SLC43A3Q8NBI5 491 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 ZNF516Q92618 1163 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 TOX2Q96NM4 488 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 OSMRQ99650 979 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 TOPORSQ9NS56 1045 aaPredicted RBP13.02□□□□□ -0.33
USF1-203ENST00000368021 MROH7Q68CQ1 1323 aa13.02□□□□□ -0.33
USF1-203ENST00000368021 EIF3CLB5ME19 914 aaKnown RBP13.01□□□□□ -0.33
USF1-203ENST00000368021 F8VZ95 297 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 RBAK-RBAKDNI3L0D1 243 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
USF1-203ENST00000368021 IL18RAPO95256 599 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 CLTAP09496 248 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 ITGB8P26012 769 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 AXLP30530 894 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 PRKCIP41743 596 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 DCAF4L1Q3SXM0 396 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 GDF6Q6KF10 455 aaPredicted RBP13.01□□□□□ -0.33
USF1-203ENST00000368021 NYAP1Q6ZVC0 841 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 RSPH3Q86UC2 560 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 SERINC5Q86VE9 423 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 TAS1R2Q8TE23 839 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 FAM81BQ96LP2 452 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 EIF3CQ99613 913 aaKnown RBP13.01□□□□□ -0.33
USF1-203ENST00000368021 DESI2Q9BSY9 194 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 PPP1R12CQ9BZL4 782 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
USF1-203ENST00000368021 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
USF1-203ENST00000368021 IPO7O95373 1038 aaKnown RBP13□□□□□ -0.33
USF1-203ENST00000368021 LCA5LO95447 670 aa13□□□□□ -0.33
USF1-203ENST00000368021 TUBB4AP04350 444 aa13□□□□□ -0.33
USF1-203ENST00000368021 ANXA13P27216 316 aa13□□□□□ -0.33
USF1-203ENST00000368021 HOXA11P31270 313 aaPredicted RBP13□□□□□ -0.33
USF1-203ENST00000368021 STAT1P42224 750 aa13□□□□□ -0.33
USF1-203ENST00000368021 KRT83P78385 493 aa13□□□□□ -0.33
USF1-203ENST00000368021 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
USF1-203ENST00000368021 ENOX2Q16206 610 aaKnown RBP13□□□□□ -0.33
USF1-203ENST00000368021 ASIC2Q16515 512 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms