RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 SLFN12LQ6IEE8 588 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 PNMA5Q96PV4 448 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 RMDN3Q96TC7 470 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 SUDS3Q9H7L9 328 aaPredicted RBP18.88■□□□□ 0.61
SMG5-201ENST00000361813 PSAPP07602 524 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 VHLP40337 213 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 ELF3P78545 371 aaPredicted RBP18.88■□□□□ 0.61
SMG5-201ENST00000361813 MIS18BP1Q6P0N0 1132 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 SESTD1Q86VW0 696 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 AGR3Q8TD06 166 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 PAGR1Q9BTK6 254 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 AGPAT3Q9NRZ7 376 aa18.88■□□□□ 0.61
SMG5-201ENST00000361813 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.88■□□□□ 0.61
SMG5-201ENST00000361813 UBE4BO95155 1302 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 H3BRJ5 948 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 PPP1R12AO14974 1030 aaPredicted RBP18.87■□□□□ 0.61
SMG5-201ENST00000361813 TBX3O15119 743 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 KRT7P08729 469 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 THOC5Q13769 683 aaKnown RBP18.87■□□□□ 0.61
SMG5-201ENST00000361813 PREPLQ4J6C6 727 aaPredicted RBP18.87■□□□□ 0.61
SMG5-201ENST00000361813 MCPH1Q8NEM0 835 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 TATDN2Q93075 761 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 ZBTB12Q9Y330 459 aaPredicted RBP18.87■□□□□ 0.61
SMG5-201ENST00000361813 PCDHGC5Q9Y5F6 944 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 NPEPPSP55786 919 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 SNRNP35Q16560 246 aaKnown RBP18.87■□□□□ 0.61
SMG5-201ENST00000361813 NLRP9Q7RTR0 991 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 SLC38A10Q9HBR0 1119 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 ABCF3Q9NUQ8 709 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 KDM6AO15550 1401 aaPredicted RBP18.87■□□□□ 0.61
SMG5-201ENST00000361813 KRT4P19013 534 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 IL17AQ16552 155 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 FSCBQ5H9T9 825 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 KIAA1586Q9HCI6 787 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 BLOC1S4Q9NUP1 217 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 CHMP2BQ9UQN3 213 aa18.87■□□□□ 0.61
SMG5-201ENST00000361813 EEF1B2P24534 225 aaKnown RBP18.86■□□□□ 0.61
SMG5-201ENST00000361813 IQCKQ8N0W5 287 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 PRCCQ92733 491 aaPredicted RBP18.86■□□□□ 0.61
SMG5-201ENST00000361813 GTF3C4Q9UKN8 822 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 ALDH5A1P51649 535 aaPredicted RBP18.86■□□□□ 0.61
SMG5-201ENST00000361813 IFRD2Q12894 506 aaPredicted RBP18.86■□□□□ 0.61
SMG5-201ENST00000361813 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 TBC1D22BQ9NU19 505 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 SGPL1O95470 568 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 LDHAP00338 332 aaKnown RBP18.86■□□□□ 0.61
SMG5-201ENST00000361813 SMARCA1P28370 1054 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 STX1BP61266 288 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 GIT2Q14161 759 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 TRIM72Q6ZMU5 477 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 SLC20A1Q8WUM9 679 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 NSL1Q96IY1 281 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 PI4K2AQ9BTU6 479 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 HEY2Q9UBP5 337 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
SMG5-201ENST00000361813 JAK3P52333 1124 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 ZNF667Q5HYK9 610 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 MAGEB18Q96M61 343 aa18.86■□□□□ 0.61
SMG5-201ENST00000361813 DNAJC6O75061 913 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 RPL21P46778 160 aaKnown RBP18.85■□□□□ 0.61
SMG5-201ENST00000361813 EEPD1Q7L9B9 569 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 KCNK18Q7Z418 384 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 NT5DC3Q86UY8 548 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 CD302Q8IX05 232 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 GPD1LQ8N335 351 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 RXFP1Q9HBX9 757 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 CLTCQ00610 1675 aaKnown RBP18.85■□□□□ 0.61
SMG5-201ENST00000361813 A0A0A6YYK5 440 aaPredicted RBP18.85■□□□□ 0.61
SMG5-201ENST00000361813 O00370 1275 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 DDX3XO00571 662 aaKnown RBP eCLIP18.85■□□□□ 0.615e-13■■□□□ 13.7
SMG5-201ENST00000361813 EIF3EP60228 445 aaKnown RBP18.85■□□□□ 0.61
SMG5-201ENST00000361813 C1orf228Q6PIY5 440 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 RCOR2Q8IZ40 523 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 CXorf38Q8TB03 319 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 IL17RBQ9NRM6 502 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 GABBR1Q9UBS5 961 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 RIPK2O43353 540 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 ZCCHC18P0CG32 403 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 BCAR1P56945 870 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 FAM160B1Q5W0V3 765 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 MANSC1Q9H8J5 431 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 INPP5FQ9Y2H2 1132 aa18.85■□□□□ 0.61
SMG5-201ENST00000361813 EIF3DO15371 548 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMG5-201ENST00000361813 NDUFB10O96000 172 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 ROR1Q01973 937 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 NIM1KQ8IY84 436 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 MIEF2Q96C03 454 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 RPS6KC1Q96S38 1066 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 APOL6Q9BWW8 343 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 ZNF341Q9BYN7 854 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 GOLGA8QA0A0J9YX86 632 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 GOLGA8OA6NCC3 632 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 GOLGA8NF8WBI6 632 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 KRT10P13645 584 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 CCND2P30279 289 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 NFIXQ14938 502 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 TRIP10Q15642 601 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 ARHGEF1Q92888 912 aaKnown RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 ALKBH8Q96BT7 664 aaKnown RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 RBAKQ9NYW8 714 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms