RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SENP6Q9GZR1 1112 aaPredicted RBP25.02■■□□□ 1.6
SDF4-202ENST00000360001 A0A1W2PQ45 241 aaPredicted RBP25.01■■□□□ 1.59
SDF4-202ENST00000360001 A0A1W2PQY0 241 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 CHRNA1P02708 482 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 KIF11P52732 1056 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 DUOXA2Q1HG44 320 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 SLC10A6Q3KNW5 377 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 APBB1IPQ7Z5R6 666 aaPredicted RBP25.01■■□□□ 1.59
SDF4-202ENST00000360001 FAM228AQ86W67 206 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 PPM1KQ8N3J5 372 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 TATDN2Q93075 761 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 HAUS4Q9H6D7 363 aa25.01■■□□□ 1.59
SDF4-202ENST00000360001 TRMT13Q9NUP7 481 aaKnown RBP25.01■■□□□ 1.59
SDF4-202ENST00000360001 PIN4Q9Y237 131 aaKnown RBP25.01■■□□□ 1.59
SDF4-202ENST00000360001 NOC2LQ9Y3T9 749 aaKnown RBP25.01■■□□□ 1.59
SDF4-202ENST00000360001 MROH7Q68CQ1 1323 aa25■■□□□ 1.59
SDF4-202ENST00000360001 A0A0U1RQJ8 604 aa25■■□□□ 1.59
SDF4-202ENST00000360001 LACTBL1A8MY62 500 aa25■■□□□ 1.59
SDF4-202ENST00000360001 ZNF263O14978 683 aa25■■□□□ 1.59
SDF4-202ENST00000360001 GFPT2O94808 682 aa25■■□□□ 1.59
SDF4-202ENST00000360001 CTSHP09668 335 aa25■■□□□ 1.59
SDF4-202ENST00000360001 FERP16591 822 aa25■■□□□ 1.59
SDF4-202ENST00000360001 SCARA3Q6AZY7 606 aa25■■□□□ 1.59
SDF4-202ENST00000360001 TRAPPC11Q7Z392 1133 aa25■■□□□ 1.59
SDF4-202ENST00000360001 ATRIPQ8WXE1 791 aa25■■□□□ 1.59
SDF4-202ENST00000360001 DEF6Q9H4E7 631 aa25■■□□□ 1.59
SDF4-202ENST00000360001 PAK6Q9NQU5 681 aaPredicted RBP25■■□□□ 1.59
SDF4-202ENST00000360001 FOXN3O00409 490 aaPredicted RBP25■■□□□ 1.59
SDF4-202ENST00000360001 LCA5LO95447 670 aa25■■□□□ 1.59
SDF4-202ENST00000360001 TFAMQ00059 246 aaKnown RBP25■■□□□ 1.59
SDF4-202ENST00000360001 PTK7Q13308 1070 aa25■■□□□ 1.59
SDF4-202ENST00000360001 NCOA4Q13772 614 aa25■■□□□ 1.59
SDF4-202ENST00000360001 DHX38Q92620 1227 aaKnown RBP25■■□□□ 1.59
SDF4-202ENST00000360001 ACAP3Q96P50 834 aa25■■□□□ 1.59
SDF4-202ENST00000360001 PHF24Q9UPV7 400 aa25■■□□□ 1.59
SDF4-202ENST00000360001 BZW2Q9Y6E2 419 aaKnown RBP25■■□□□ 1.59
SDF4-202ENST00000360001 CITO14578 2027 aa24.99■■□□□ 1.59
SDF4-202ENST00000360001 EVI5O60447 810 aa24.99■■□□□ 1.59
SDF4-202ENST00000360001 MFAP3P55082 362 aa24.99■■□□□ 1.59
SDF4-202ENST00000360001 PTK2Q05397 1052 aa24.99■■□□□ 1.59
SDF4-202ENST00000360001 SLC43A3Q8NBI5 491 aa24.99■■□□□ 1.59
SDF4-202ENST00000360001 ASB7Q9H672 318 aa24.99■■□□□ 1.59
SDF4-202ENST00000360001 GOLGA6L9A6NEM1 432 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 AKR1B10O60218 316 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 PHACTR2O75167 634 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 NFICP08651 508 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 THPOP40225 353 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 MTFR1Q15390 333 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 PTPN14Q15678 1187 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 TRIM71Q2Q1W2 868 aaKnown RBP24.98■■□□□ 1.59
SDF4-202ENST00000360001 ZNF571Q7Z3V5 609 aaPredicted RBP24.98■■□□□ 1.59
SDF4-202ENST00000360001 FMNL3Q8IVF7 1028 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 DNAJC5GQ8N7S2 189 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 C1orf112Q9NSG2 853 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 CST3P01034 146 aaPredicted RBP24.98■■□□□ 1.59
SDF4-202ENST00000360001 TMEM191BP0C7N4 346 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 KRT83P78385 493 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 CYP27A1Q02318 531 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 GCNT1Q02742 428 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 WDR44Q5JSH3 913 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 UBXN11Q5T124 520 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 JADE1Q6IE81 842 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 ANKRD36BP1Q96IX9 119 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 CCDC94Q9BW85 323 aaPredicted RBP24.98■■□□□ 1.59
SDF4-202ENST00000360001 APOBEC3GQ9HC16 384 aaKnown RBP24.98■■□□□ 1.59
SDF4-202ENST00000360001 STARD7Q9NQZ5 370 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 NOD1Q9Y239 953 aa24.98■■□□□ 1.59
SDF4-202ENST00000360001 KBTBD13C9JR72 458 aa24.97■■□□□ 1.59
SDF4-202ENST00000360001 SPOPLQ6IQ16 392 aa24.97■■□□□ 1.59
SDF4-202ENST00000360001 SHC3Q92529 594 aa24.97■■□□□ 1.59
SDF4-202ENST00000360001 SNTG2Q9NY99 539 aa24.97■■□□□ 1.59
SDF4-202ENST00000360001 IPO7O95373 1038 aaKnown RBP24.96■■□□□ 1.59
SDF4-202ENST00000360001 TNNC2P02585 160 aa24.96■■□□□ 1.59
SDF4-202ENST00000360001 GFPT1Q06210 699 aaPredicted RBP24.96■■□□□ 1.59
SDF4-202ENST00000360001 ENOSF1Q7L5Y1 443 aa24.96■■□□□ 1.59
SDF4-202ENST00000360001 HES2Q9Y543 173 aa24.96■■□□□ 1.59
SDF4-202ENST00000360001 RALGAPA2Q2PPJ7 1873 aa24.96■■□□□ 1.59
SDF4-202ENST00000360001 A0A0U1RQG5 324 aaPredicted RBP24.96■■□□□ 1.59
SDF4-202ENST00000360001 RPS6KA5O75582 802 aa24.96■■□□□ 1.59
SDF4-202ENST00000360001 MYCP01106 439 aaPredicted RBP24.96■■□□□ 1.59
SDF4-202ENST00000360001 FAM81BQ96LP2 452 aa24.96■■□□□ 1.59
SDF4-202ENST00000360001 TRIM6Q9C030 488 aaPredicted RBP24.96■■□□□ 1.59
SDF4-202ENST00000360001 NXF3Q9H4D5 531 aaKnown RBP24.96■■□□□ 1.59
SDF4-202ENST00000360001 LZTFL1Q9NQ48 299 aa24.96■■□□□ 1.59
SDF4-202ENST00000360001 ASS1P00966 412 aaKnown RBP24.95■■□□□ 1.58
SDF4-202ENST00000360001 TNNT1P13805 278 aa24.95■■□□□ 1.58
SDF4-202ENST00000360001 ARHGAP25P42331 645 aa24.95■■□□□ 1.58
SDF4-202ENST00000360001 NOP14P78316 857 aaKnown RBP24.95■■□□□ 1.58
SDF4-202ENST00000360001 SPA17Q15506 151 aa24.95■■□□□ 1.58
SDF4-202ENST00000360001 FAM71AQ8IYT1 594 aa24.95■■□□□ 1.58
SDF4-202ENST00000360001 DEFB118Q96PH6 123 aa24.95■■□□□ 1.58
SDF4-202ENST00000360001 TRPV6Q9H1D0 765 aa24.95■■□□□ 1.58
SDF4-202ENST00000360001 ST3GAL5Q9UNP4 418 aa24.95■■□□□ 1.58
SDF4-202ENST00000360001 A0A087X0T9 212 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 DNM1LO00429 736 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 CCDC172P0C7W6 258 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 FAM228BP0C875 321 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 CCL5P13501 91 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 SLC18A3Q16572 532 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 DNTTIP2Q5QJE6 756 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms