RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 TBC1D7Q9P0N9 293 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 DDX25Q9UHL0 483 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 AJAP1Q9UKB5 411 aaPredicted RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 MTMR7Q9Y216 660 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 NR2E1Q9Y466 385 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 USP15Q9Y4E8 981 aaPredicted RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 CFAP54Q96N23 3096 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 MAST4O15021 2626 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 E9PMD0 336 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 PDXKO00764 312 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 CALUO43852 315 aaPredicted RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 PHF2O75151 1096 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 GJB6O95452 261 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 GGPS1O95749 300 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 BAG3O95817 575 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 LDHCP07864 332 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 VIMP08670 466 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 CHRNA3P32297 505 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 ALDH5A1P51649 535 aaPredicted RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 SLC12A3P55017 1021 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 PPARDQ03181 441 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 MAPK7Q13164 816 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 AUHQ13825 339 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 KNOP1Q1ED39 458 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 BMT2Q1RMZ1 405 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 ASPRV1Q53RT3 343 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 FAM133BQ5BKY9 247 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 TAOK1Q7L7X3 1001 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 SLC35G2Q8TBE7 412 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 TBC1D16Q8TBP0 767 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 WDR66Q8TBY9 1149 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 CELF1Q92879 486 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 IFT74Q96LB3 600 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 ZNF570Q96NI8 536 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 RUNDC3BQ96NL0 473 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 PRMT1Q99873 361 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 TRIM31Q9BZY9 425 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 DHX36Q9H2U1 1008 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 ARHGEF3Q9NR81 526 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 HOMER3Q9NSC5 361 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 SLC5A4Q9NY91 659 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 MTRF1LQ9UGC7 380 aaKnown RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 PCYOX1Q9UHG3 505 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 PPP1R9AQ9ULJ8 1098 aa8.06□□□□□ -1.12
C11orf54-202ENST00000354421 CORO1CQ9ULV4 474 aaPredicted RBP8.06□□□□□ -1.12
C11orf54-202ENST00000354421 PLIN4Q96Q06 1357 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 DDX60LQ5H9U9 1706 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 NPHP3-ACAD11A0A0J9YXS1 232 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 TLDC2A0PJX2 215 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 USP17L5A8MUK1 530 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 MIF4GDA9UHW6 222 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 IGF2BP3O00425 579 aaKnown RBP eCLIP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 PODXLO00592 558 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 RASGRF2O14827 1237 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 SMNDC1O75940 238 aaKnown RBP eCLIP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 SUN1O94901 812 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 LDHBP07195 334 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 XRCC5P13010 732 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 RARGP13631 454 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 VCAM1P19320 739 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 CTNNA2P26232 953 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 SOX5P35711 763 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 SKIV2L2P42285 1042 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 PLTPP55058 493 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 RPS8P62241 208 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 KCNJ2P63252 427 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 RELBQ01201 579 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 SLC29A2Q14542 456 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 NFIL3Q16649 462 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 PTPROQ16827 1216 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 ZNF568Q3ZCX4 644 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 ARSHQ5FYA8 562 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 LYPD4Q6UWN0 246 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 DLK2Q6UY11 383 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 ASRGL1Q7L266 308 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 DNAAF5Q86Y56 855 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 RNF217Q8TC41 542 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 TGFBRAP1Q8WUH2 860 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 JDP2Q8WYK2 163 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 COA7Q96BR5 231 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 THOC1Q96FV9 657 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 FBXL18Q96ME1 805 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 MBOAT7Q96N66 472 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 ERVK-5Q9HDB9 667 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 TYW1Q9NV66 732 aaKnown RBP8.05□□□□□ -1.12
C11orf54-202ENST00000354421 GPRC5DQ9NZD1 345 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 PRKAG3Q9UGI9 489 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 PCDHA12Q9UN75 941 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 ARL2BPQ9Y2Y0 163 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 SNX24Q9Y343 169 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 PCDHA3Q9Y5H8 950 aa8.05□□□□□ -1.12
C11orf54-202ENST00000354421 GPR179Q6PRD1 2367 aa8.04□□□□□ -1.12
C11orf54-202ENST00000354421 PNMA6FA0A0J9YX94 578 aa8.04□□□□□ -1.12
C11orf54-202ENST00000354421 FAM86C2PA6NEL3 165 aa8.04□□□□□ -1.12
C11orf54-202ENST00000354421 RIPK2O43353 540 aa8.04□□□□□ -1.12
C11orf54-202ENST00000354421 LUC7L3O95232 432 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms