RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CKAP2Q8WWK9 683 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 HERVK_113Q902F9 699 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 SCYL1Q96KG9 808 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 NHEJ1Q9H9Q4 299 aaPredicted RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 DBF4Q9UBU7 674 aaPredicted RBP9.1□□□□□ -0.95
TDP1-201ENST00000335725 DNM3Q9UQ16 869 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 MYH7BA7E2Y1 1941 aa9.1□□□□□ -0.95
TDP1-201ENST00000335725 A0A1W2PQC6 194 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 TLDC2A0PJX2 215 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 TRIM64A6NGJ6 449 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 TRIM64BA6NI03 449 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 RSPH10B2B2RC85 870 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 SIN3BO75182 1162 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 PRLP01236 227 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 RSPH10BP0C881 870 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 CCDC58Q4VC31 144 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 ZNF449Q6P9G9 518 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 KRT77Q7Z794 578 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 FRS2Q8WU20 508 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 PLEKHA8Q96JA3 519 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 LPIN3Q9BQK8 851 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 PAIP1Q9H074 479 aaKnown RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 CCDC113Q9H0I3 377 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 NEO1Q92859 1461 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 YKT6O15498 198 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 GPC4O75487 556 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 POLR3DP05423 398 aaPredicted RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 TFAP2AP05549 437 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 ANPEPP15144 967 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 UBXN1Q04323 297 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 TRAP1Q12931 704 aaKnown RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 BEND5Q7L4P6 421 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 ZNF410Q86VK4 478 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 KIAA2013Q8IYS2 634 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 TRIM63Q969Q1 353 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 FBXL18Q96ME1 805 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 FERD3LQ96RJ6 166 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 PSMB7Q99436 277 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 BTBD10Q9BSF8 475 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 ARMC7Q9H6L4 198 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 OLFML3Q9NRN5 406 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 TBC1D14Q9P2M4 693 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 SLC22A1O15245 554 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 KPNA6O60684 536 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 CIB2O75838 187 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 MARCKSP29966 332 aaPredicted RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 CDK9P50750 372 aaKnown RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 P2RX3P56373 397 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 FCHO2Q0JRZ9 810 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 PPP2R5CQ13362 524 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 KRT31Q15323 416 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 EGFLAMQ63HQ2 1017 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 CORO6Q6QEF8 472 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 IDO2Q6ZQW0 420 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 ELMOD2Q8IZ81 293 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 C8orf58Q8NAV2 365 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 CFAP36Q96G28 342 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 BTBD9Q96Q07 612 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 PITPNM3Q9BZ71 974 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 TRPV6Q9H1D0 765 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 EBF3Q9H4W6 596 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 SIAEQ9HAT2 523 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 IL1RAPL2Q9NP60 686 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 MAN1C1Q9NR34 630 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 SMARCAL1Q9NZC9 954 aa9.09□□□□□ -0.95
TDP1-201ENST00000335725 CNOT7Q9UIV1 285 aaKnown RBP9.09□□□□□ -0.95
TDP1-201ENST00000335725 AKAP12Q02952 1782 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 TTC26A0AVF1 554 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 TNFAIP8O95379 198 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 MOCS3O95396 460 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 CAPN1P07384 714 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 ALOX5P09917 674 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 VCLP18206 1134 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 BTF3P20290 206 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 PRKCEQ02156 737 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 FLIIQ13045 1269 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 SHC4Q6S5L8 630 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 TMC5Q6UXY8 1006 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 DSTYKQ6XUX3 929 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 MCM10Q7L590 875 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 ADGRG6Q86SQ4 1221 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 PDSS2Q86YH6 399 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 RELL1Q8IUW5 271 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 CCDC28AQ8IWP9 274 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 KIAA1958Q8N8K9 716 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 MINDY2Q8NBR6 621 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 METTL2AQ96IZ6 378 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 INPP4AQ96PE3 977 aaPredicted RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 TGS1Q96RS0 853 aaKnown RBP9.08□□□□□ -0.96
TDP1-201ENST00000335725 TSG101Q99816 390 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 TMEM109Q9BVC6 243 aa9.08□□□□□ -0.96
TDP1-201ENST00000335725 MTFR1LQ9H019 292 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms