RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PLEKHA5Q9HAU0 1116 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 FNIP2Q9P278 1114 aa30.15■■■□□ 2.42
ATPAF1-201ENST00000329231 SPDYE4A6NLX3 237 aa30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 IDEP14735 1019 aa30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 DNM1Q05193 864 aaKnown RBP30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 ZC2HC1CQ53FD0 456 aaPredicted RBP30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 RARS2Q5T160 578 aaKnown RBP30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 ELMSAN1Q6PJG2 1045 aa30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 SHC4Q6S5L8 630 aa30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 GOLGA2P5Q9HBQ8 144 aa30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 DPP7Q9UHL4 492 aa30.14■■■□□ 2.42
ATPAF1-201ENST00000329231 OGTO15294 1046 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 GLUD1P00367 558 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 SOX4Q06945 474 aaPredicted RBP30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 RTP2Q5QGT7 225 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 CEP57Q86XR8 500 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 C12orf76Q8N812 135 aaPredicted RBP30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 IQUBQ8NA54 791 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 NECTIN4Q96NY8 510 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 TNMDQ9H2S6 317 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 SFXN1Q9H9B4 322 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 PCDHA7Q9UN72 937 aa30.13■■■□□ 2.41
ATPAF1-201ENST00000329231 A0A0B4J269 797 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 MEFVO15553 781 aaPredicted RBP30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 TRAPPC3O43617 180 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 C1RP00736 705 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 CXCL8P10145 99 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 MTHFRP42898 656 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 E2F4Q16254 413 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 HERC4Q5GLZ8 1057 aaPredicted RBP30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 SLFN12LQ6IEE8 588 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 PDXDC1Q6P996 788 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 RIPOR3Q96MK2 946 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 MSTO1Q9BUK6 570 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 OLFML3Q9NRN5 406 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 TRIP11Q15643 1979 aa30.12■■■□□ 2.41
ATPAF1-201ENST00000329231 FRMD3A2A2Y4 597 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 RPL9P32969 192 aaKnown RBP30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 AMPD3Q01432 767 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 SLC39A4Q6P5W5 647 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 PIK3R5Q8WYR1 880 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 KHSRPQ92945 711 aaKnown RBP eCLIP30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 DHX58Q96C10 678 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 C1QTNF1Q9BXJ1 281 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 PANK4Q9NVE7 773 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 KBTBD4Q9NVX7 518 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 FAM13BQ9NYF5 915 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 RCOR1Q9UKL0 485 aa30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.11■■■□□ 2.41
ATPAF1-201ENST00000329231 TTC26A0AVF1 554 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 LOC730098B7Z3J9 87 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 PI4K2BG5E9Z4 385 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 PODXLO00592 558 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 PPP1R37O75864 691 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 TNFSF9P41273 254 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 PPP2R3AQ06190 1150 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 ATAT1Q5SQI0 421 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 PRSS55Q6UWB4 352 aaPredicted RBP30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 CCDC65Q8IXS2 484 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 C18orf25Q96B23 403 aaPredicted RBP30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 RPGRIP1Q96KN7 1286 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 STRA6Q9BX79 667 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 EPHX3Q9H6B9 360 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 RPF1Q9H9Y2 349 aaKnown RBP30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 MAN1C1Q9NR34 630 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 TBC1D7Q9P0N9 293 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 EXOC7Q9UPT5 735 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 PCDHB13Q9Y5F0 798 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 CITO14578 2027 aa30.1■■■□□ 2.41
ATPAF1-201ENST00000329231 FAM189A1O60320 539 aa30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 ALADP13716 330 aa30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 ALCAMQ13740 583 aa30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 PSMD5Q16401 504 aa30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 CD300LGQ6UXG3 332 aa30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 C3orf58Q8NDZ4 430 aa30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 LNX1Q8TBB1 728 aaPredicted RBP30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 STAMQ92783 540 aa30.09■■■□□ 2.41
ATPAF1-201ENST00000329231 ANKRD63C9JTQ0 380 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 GCNT3O95395 438 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 RPL17P18621 184 aaKnown RBP30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 FGFR3P22607 806 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 TMC5Q6UXY8 1006 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 PALB2Q86YC2 1186 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 GLYCTKQ8IVS8 523 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 HDAC7Q8WUI4 952 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 ACCSQ96QU6 501 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 TSPAN18Q96SJ8 248 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 MAGEF1Q9HAY2 307 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 CDH22Q9UJ99 828 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 ZDHHC9Q9Y397 364 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 STYXL1Q9Y6J8 313 aa30.08■■■□□ 2.41
ATPAF1-201ENST00000329231 POLR2DO15514 142 aaKnown RBP30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 IGFBP6P24592 240 aaPredicted RBP30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 POSTNQ15063 836 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 ENOX2Q16206 610 aaKnown RBP30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 ZBTB41Q5SVQ8 909 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 L1TD1Q5T7N2 865 aaKnown RBP30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 RESP18Q5W5W9 173 aa30.07■■■□□ 2.4
ATPAF1-201ENST00000329231 ADALQ6DHV7 355 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms