RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ICAM1P05362 532 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 SKIP12755 728 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 NFIAQ12857 509 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 E2F4Q16254 413 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 VPS39Q96JC1 886 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 ZIM3Q96PE6 472 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 PNKPQ96T60 521 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 KIFC3Q9BVG8 833 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 FOXP2O15409 715 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 CSPG5O95196 566 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 MDM2Q00987 491 aaPredicted RBP17.29■□□□□ 0.36
BRD3-201ENST00000303407 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
BRD3-201ENST00000303407 TPCN2Q8NHX9 752 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 ISCUQ9H1K1 167 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 SMARCAD1Q9H4L7 1026 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 ANKEF1Q9NU02 776 aa17.29■□□□□ 0.36
BRD3-201ENST00000303407 EIF3HO15372 352 aaKnown RBP eCLIP17.28■□□□□ 0.36
BRD3-201ENST00000303407 KCNN4O15554 427 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 SMIM24O75264 130 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 ARFIP2P53365 341 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 SYCP2LQ5T4T6 812 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 MOXD1Q6UVY6 613 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 CYTH2Q99418 400 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 TBX20Q9UMR3 447 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 PLAGL2Q9UPG8 496 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 GSTA4O15217 222 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 SH3BGRP55822 239 aaPredicted RBP17.28■□□□□ 0.36
BRD3-201ENST00000303407 IL1RL1Q01638 556 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 Q4G0T1 1027 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 ZDHHC15Q96MV8 337 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 EFHD1Q9BUP0 239 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 TRIM4Q9C037 500 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 NPEPPSP55786 919 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 GIT2Q14161 759 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 IL17RBQ9NRM6 502 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
BRD3-201ENST00000303407 ALG6Q9Y672 507 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 SULT1E1P49888 294 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 PAPOLAP51003 745 aaKnown RBP17.28■□□□□ 0.36
BRD3-201ENST00000303407 TMEM132DQ14C87 1099 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
BRD3-201ENST00000303407 IFT43Q96FT9 208 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 HAUS8Q9BT25 410 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 CHORDC1Q9UHD1 332 aaPredicted RBP17.28■□□□□ 0.36
BRD3-201ENST00000303407 SCOCQ9UIL1 159 aa17.28■□□□□ 0.36
BRD3-201ENST00000303407 TCP11X1B4DZS4 312 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 SREBF1P36956 1147 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 YWHAHQ04917 246 aaPredicted RBP17.27■□□□□ 0.36
BRD3-201ENST00000303407 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
BRD3-201ENST00000303407 PIGHQ14442 188 aaPredicted RBP17.27■□□□□ 0.36
BRD3-201ENST00000303407 FSCBQ5H9T9 825 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 ATG4CQ96DT6 458 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 THAP2Q9H0W7 228 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 H0Y3Z8 333 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 DDX42Q86XP3 938 aaKnown RBP eCLIP17.27■□□□□ 0.36
BRD3-201ENST00000303407 TRABDQ9H4I3 376 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 DUSP10Q9Y6W6 482 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 RGS7P49802 495 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 RBP5P82980 135 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 AGBL2Q5U5Z8 902 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 ITPRIPL1Q6GPH6 555 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 NUDCD3Q8IVD9 361 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 GMCL1P1Q8NEA9 526 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 ACER1Q8TDN7 264 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 PIN4Q9Y237 131 aaKnown RBP17.27■□□□□ 0.36
BRD3-201ENST00000303407 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 BCL9O00512 1426 aa17.27■□□□□ 0.36
BRD3-201ENST00000303407 MAFGO15525 162 aa17.27■□□□□ 0.35
BRD3-201ENST00000303407 IL1R1P14778 569 aa17.27■□□□□ 0.35
BRD3-201ENST00000303407 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.35
BRD3-201ENST00000303407 KIF19Q2TAC6 998 aa17.27■□□□□ 0.35
BRD3-201ENST00000303407 HIPK4Q8NE63 616 aa17.27■□□□□ 0.35
BRD3-201ENST00000303407 RBM15Q96T37 977 aaKnown RBP eCLIP17.27■□□□□ 0.355e-6■■■■□ 21.8
BRD3-201ENST00000303407 FAM96AQ9H5X1 160 aa17.27■□□□□ 0.35
BRD3-201ENST00000303407 GNGT2O14610 69 aa17.27■□□□□ 0.35
BRD3-201ENST00000303407 RPS6P62753 249 aaKnown RBP17.27■□□□□ 0.35
BRD3-201ENST00000303407 LRRC31Q6UY01 552 aa17.27■□□□□ 0.35
BRD3-201ENST00000303407 CHEK2O96017 543 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 DPEP1P16444 411 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 BIRC2Q13490 618 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 NBPF9Q3BBW0 867 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 ACAD11Q709F0 780 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 HNRNPLLQ8WVV9 542 aaKnown RBP17.26■□□□□ 0.35
BRD3-201ENST00000303407 DONSONQ9NYP3 566 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 GGA3Q9NZ52 723 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 WDR35Q9P2L0 1181 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 CLGNO14967 610 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 OCRLQ01968 901 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 PARP9Q8IXQ6 854 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 URGCPQ8TCY9 931 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
BRD3-201ENST00000303407 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 FBXO28Q9NVF7 368 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 GTSE1Q9NYZ3 720 aa17.26■□□□□ 0.35
BRD3-201ENST00000303407 PMS1P54277 932 aaKnown RBP17.26■□□□□ 0.35
BRD3-201ENST00000303407 ATF7IP2Q5U623 682 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms