RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 AADACL2Q6P093 401 aa26.83■■□□□ 1.88
ROM1-201ENST00000278833 ART4Q93070 314 aa26.83■■□□□ 1.88
ROM1-201ENST00000278833 KIFC3Q9BVG8 833 aa26.83■■□□□ 1.88
ROM1-201ENST00000278833 TRIM31Q9BZY9 425 aa26.83■■□□□ 1.88
ROM1-201ENST00000278833 GMNCA6NCL1 334 aa26.82■■□□□ 1.88
ROM1-201ENST00000278833 EXTL3O43909 919 aa26.82■■□□□ 1.88
ROM1-201ENST00000278833 SLC1A1P43005 524 aa26.82■■□□□ 1.88
ROM1-201ENST00000278833 IFFO1Q0D2I5 559 aa26.82■■□□□ 1.88
ROM1-201ENST00000278833 PTP4A2Q12974 167 aa26.82■■□□□ 1.88
ROM1-201ENST00000278833 DGKZQ13574 1117 aa26.82■■□□□ 1.88
ROM1-201ENST00000278833 TTC31Q49AM3 519 aaPredicted RBP26.82■■□□□ 1.88
ROM1-201ENST00000278833 SYDE1Q6ZW31 735 aaPredicted RBP26.82■■□□□ 1.88
ROM1-201ENST00000278833 TAS1R3Q7RTX0 852 aa26.82■■□□□ 1.88
ROM1-201ENST00000278833 ADAT2Q7Z6V5 191 aaKnown RBP26.82■■□□□ 1.88
ROM1-201ENST00000278833 ATMINO43313 823 aaPredicted RBP26.81■■□□□ 1.88
ROM1-201ENST00000278833 MAN1A1P33908 653 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 BPIFB4P59827 614 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 C6orf89Q6UWU4 347 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 DLK2Q6UY11 383 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 IFT74Q96LB3 600 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 CENPHQ9H3R5 247 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 JPH1Q9HDC5 661 aaPredicted RBP26.81■■□□□ 1.88
ROM1-201ENST00000278833 TOPORSQ9NS56 1045 aaPredicted RBP26.81■■□□□ 1.88
ROM1-201ENST00000278833 CNOT8Q9UFF9 292 aaKnown RBP26.81■■□□□ 1.88
ROM1-201ENST00000278833 RIPK3Q9Y572 518 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 RGS20O76081 388 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 DSG3P32926 999 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 PLTPP55058 493 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 MAGOHP61326 146 aaKnown RBP26.81■■□□□ 1.88
ROM1-201ENST00000278833 ADCY2Q08462 1091 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 DRP2Q13474 957 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 PPP1R2P3Q6NXS1 205 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 ABHD15Q6UXT9 468 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 SULF1Q8IWU6 871 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 CYP26B1Q9NR63 512 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 C1orf112Q9NSG2 853 aa26.81■■□□□ 1.88
ROM1-201ENST00000278833 ZNF214Q9UL59 606 aaPredicted RBP26.81■■□□□ 1.88
ROM1-201ENST00000278833 ADM5C9JUS6 153 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 HNRNPDLO14979 420 aaKnown RBP26.8■■□□□ 1.88
ROM1-201ENST00000278833 ITGBL1O95965 494 aaPredicted RBP26.8■■□□□ 1.88
ROM1-201ENST00000278833 RARAP10276 462 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 RARGP13631 454 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 ZNF568Q3ZCX4 644 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 TNFAIP8L3Q5GJ75 292 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 RNF25Q96BH1 459 aaPredicted RBP26.8■■□□□ 1.88
ROM1-201ENST00000278833 CYFIP2Q96F07 1278 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 WHRNQ9P202 907 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 SLC9A2Q9UBY0 812 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 MYPNQ86TC9 1320 aa26.8■■□□□ 1.88
ROM1-201ENST00000278833 E7EVH7 732 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 KIAA0754O94854 1291 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 FSBPO95073 299 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 PRKCEQ02156 737 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 ZACNQ401N2 412 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 XKR3Q5GH77 459 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 TRIM72Q6ZMU5 477 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 APOBEC3FQ8IUX4 373 aaKnown RBP26.79■■□□□ 1.88
ROM1-201ENST00000278833 ZNF280CQ8ND82 737 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 TATDN2Q93075 761 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 POP1Q99575 1024 aaKnown RBP26.79■■□□□ 1.88
ROM1-201ENST00000278833 RABEP2Q9H5N1 569 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 ACP6Q9NPH0 428 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 PCDHB2Q9Y5E7 798 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 DOCK5Q9H7D0 1870 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 SPATA31C2B4DYI2 1134 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 CYP1A1P04798 512 aaPredicted RBP26.79■■□□□ 1.88
ROM1-201ENST00000278833 CENPCQ03188 943 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 MCOLN2Q8IZK6 566 aa26.79■■□□□ 1.88
ROM1-201ENST00000278833 MYH9P35579 1960 aaKnown RBP26.78■■□□□ 1.88
ROM1-201ENST00000278833 AGTP01019 485 aa26.78■■□□□ 1.88
ROM1-201ENST00000278833 SEC24CP53992 1094 aa26.78■■□□□ 1.88
ROM1-201ENST00000278833 FSTL1Q12841 308 aa26.78■■□□□ 1.88
ROM1-201ENST00000278833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.78■■□□□ 1.88
ROM1-201ENST00000278833 WNK4Q96J92 1243 aa26.78■■□□□ 1.88
ROM1-201ENST00000278833 C19orf81C9J6K1 198 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 ECEL1O95672 775 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 SUPT20HL2P0C7V6 817 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 ICAM3P32942 547 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 MMP13P45452 471 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 ACTR2P61160 394 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 GNPTABQ3T906 1256 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 SUPT20HL1Q3ZLR7 823 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 ODF2Q5BJF6 829 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 C6orf118Q5T5N4 469 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 SNRNP48Q6IEG0 339 aaKnown RBP26.77■■□□□ 1.88
ROM1-201ENST00000278833 MIS18BP1Q6P0N0 1132 aa26.77■■□□□ 1.88
ROM1-201ENST00000278833 CCDC60Q8IWA6 550 aaPredicted RBP26.77■■□□□ 1.88
ROM1-201ENST00000278833 STMN4Q9H169 189 aaPredicted RBP26.77■■□□□ 1.88
ROM1-201ENST00000278833 POLR3FQ9H1D9 316 aaPredicted RBP26.77■■□□□ 1.88
ROM1-201ENST00000278833 ANKRD65E5RJM6 399 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 CAND2O75155 1236 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 PLCB4Q15147 1175 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 MFSD5Q6N075 450 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 TRMT10CQ7L0Y3 403 aaKnown RBP26.76■■□□□ 1.88
ROM1-201ENST00000278833 PACS2Q86VP3 889 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 RAPGEF5Q92565 580 aa26.76■■□□□ 1.88
ROM1-201ENST00000278833 ROPN1BQ9BZX4 212 aaPredicted RBP26.76■■□□□ 1.88
ROM1-201ENST00000278833 ROPN1Q9HAT0 212 aaPredicted RBP26.76■■□□□ 1.88
ROM1-201ENST00000278833 BCCIPQ9P287 314 aaKnown RBP eCLIP26.76■■□□□ 1.88
ROM1-201ENST00000278833 SEPT9Q9UHD8 586 aaPredicted RBP26.76■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms