RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 HTR3DQ70Z44 454 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 LIMS2Q7Z4I7 341 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 HEATR3Q7Z4Q2 680 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 POLNQ7Z5Q5 900 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 GIMAP8Q8ND71 665 aaPredicted RBP5.67□□□□□ -1.5
CCDC54-201ENST00000261058 IL17RDQ8NFM7 739 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 OR52N2Q8NGI0 321 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 TTC17Q96AE7 1141 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 ARL8AQ96BM9 186 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 OR14A2Q96R54 314 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 MRI1Q9BV20 369 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 C11orf54Q9H0W9 315 aaPredicted RBP5.67□□□□□ -1.5
CCDC54-201ENST00000261058 WDCPQ9H6R7 721 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 LMBRD1Q9NUN5 540 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 JAG2Q9Y219 1238 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 PCDHA3Q9Y5H8 950 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 ZNF536O15090 1300 aa5.67□□□□□ -1.5
CCDC54-201ENST00000261058 F2RL2O00254 374 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 HOXA5P20719 270 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 PRDX5P30044 214 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 MSX2P35548 267 aaPredicted RBP5.66□□□□□ -1.5
CCDC54-201ENST00000261058 CLRN1P58418 232 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 PLS1Q14651 629 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 MAP9Q49MG5 647 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 C1QL3Q5VWW1 255 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 SPTY2D1Q68D10 685 aaPredicted RBP5.66□□□□□ -1.5
CCDC54-201ENST00000261058 GADL1Q6ZQY3 521 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 Q6ZSN1 163 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 TTLL10Q6ZVT0 673 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 FAM83AQ86UY5 434 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 CCDC146Q8IYE0 955 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 MYOCQ99972 504 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 NDC1Q9BTX1 674 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 CPEB1Q9BZB8 566 aaKnown RBP5.66□□□□□ -1.5
CCDC54-201ENST00000261058 CD248Q9HCU0 757 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
CCDC54-201ENST00000261058 FRS3O43559 492 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 KRT18P05783 430 aaKnown RBP5.65□□□□□ -1.5
CCDC54-201ENST00000261058 MYL1P05976 194 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 PHKG2P15735 406 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 ATP5JP18859 108 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 GPSM2P81274 684 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 PABPC1LQ4VXU2 614 aaKnown RBP5.65□□□□□ -1.5
CCDC54-201ENST00000261058 DCAF17Q5H9S7 520 aaPredicted RBP5.65□□□□□ -1.5
CCDC54-201ENST00000261058 EMC10Q5UCC4 262 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 NAIF1Q69YI7 327 aaPredicted RBP5.65□□□□□ -1.5
CCDC54-201ENST00000261058 GLB1LQ6UWU2 654 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 MAMDC4Q6UXC1 1216 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 MAEAQ7L5Y9 396 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 DAAM2Q86T65 1068 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 FAM156AQ8NDB6 213 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 Q8TCH9 128 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 ST8SIA2Q92186 375 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 SLC35A4Q96G79 324 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 TMEM176AQ96HP8 235 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 C20orf173Q96LM9 149 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 ATP6V0A4Q9HBG4 840 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 PNPOQ9NVS9 261 aa5.65□□□□□ -1.5
CCDC54-201ENST00000261058 CNOT11Q9UKZ1 510 aaKnown RBP5.65□□□□□ -1.5
CCDC54-201ENST00000261058 CAPN8A6NHC0 703 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 IPO13O94829 963 aaKnown RBP5.65□□□□□ -1.51
CCDC54-201ENST00000261058 CD1AP06126 327 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 SBK3P0C264 359 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 RAP2AP10114 183 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 SLC6A4P31645 630 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 RABGGTBP53611 331 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 FAM193AP78312 1265 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 SEMA5AQ13591 1074 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 ELAVL1Q15717 326 aaKnown RBP5.65□□□□□ -1.51
CCDC54-201ENST00000261058 FLYWCH1Q4VC44 716 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 XYLT1Q86Y38 959 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 PJA1Q8NG27 643 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 MIEF2Q96C03 454 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 SLC39A13Q96H72 371 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 C22orf23Q9BZE7 217 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 BHMT2Q9H2M3 363 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 MRPL46Q9H2W6 279 aaKnown RBP5.65□□□□□ -1.51
CCDC54-201ENST00000261058 ABCF2Q9UG63 623 aa5.65□□□□□ -1.51
CCDC54-201ENST00000261058 RUVBL1Q9Y265 456 aaKnown RBP5.65□□□□□ -1.51
CCDC54-201ENST00000261058 ANO9A1A5B4 782 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 PRSS29PA6NIE9 313 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 GRM6O15303 877 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 SLC43A1O75387 559 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 AMHP03971 560 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 GNAT2P19087 354 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 COMTP21964 271 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 FGL2Q14314 439 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 LLGL1Q15334 1064 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 CNN3Q15417 329 aaKnown RBP5.64□□□□□ -1.51
CCDC54-201ENST00000261058 ATP2B3Q16720 1220 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 PPP1R3BQ86XI6 285 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 COL23A1Q86Y22 540 aaPredicted RBP5.64□□□□□ -1.51
CCDC54-201ENST00000261058 ELOA2Q8IYF1 753 aaPredicted RBP5.64□□□□□ -1.51
CCDC54-201ENST00000261058 D2HGDHQ8N465 521 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 ANKS1AQ92625 1134 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 EDAQ92838 391 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms