RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	MATALPHA1	P0CY06	175 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	HMLALPHA1	P0CY07	175 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	SCO1	P23833	295 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	KRR1	P25586	316 aa	Predicted RBP	4.15	□□□□□ -1.74
SUP35	YDR172W	WBP1	P33767	430 aa	Known RBP	4.15	□□□□□ -1.74
SUP35	YDR172W	SSH1	P38353	490 aa	Known RBP	4.15	□□□□□ -1.74
SUP35	YDR172W	SYS1	P41544	203 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	BUD8	P41698	603 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	ECM27	P47144	725 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	PBP1	P53297	722 aa	Known RBP	4.15	□□□□□ -1.74
SUP35	YDR172W	OKP1	P53298	406 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	RSM27	P53305	110 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	CTF19	Q02732	369 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	TRS23	Q03784	219 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	CTS2	Q06350	511 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	YPR147C	Q06522	304 aa	Known RBP	4.15	□□□□□ -1.74
SUP35	YDR172W	RDL2	Q08742	149 aa	Known RBP	4.15	□□□□□ -1.74
SUP35	YDR172W	AKR2	Q12013	749 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	FSH3	Q99369	266 aa		4.15	□□□□□ -1.74
SUP35	YDR172W	YAL064W-B	O13512	126 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	DSF1	P0CX08	502 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	YNR073C	P0CX09	502 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	AIM17	P23180	465 aa	Known RBP	4.15	□□□□□ -1.75
SUP35	YDR172W	YCR016W	P25617	290 aa	Known RBP	4.15	□□□□□ -1.75
SUP35	YDR172W	MRP17	P28778	131 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	APD1	P38281	316 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	OM14	P38325	134 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	OCA1	P50946	238 aa	Predicted RBP	4.15	□□□□□ -1.75
SUP35	YDR172W	POP6	P53218	158 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	SLI1	P53304	468 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	ATG21	Q02887	496 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	YDR102C	Q03864	110 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	YAP6	Q03935	383 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	RXT3	Q07458	294 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	SYC1	Q08553	188 aa	Predicted RBP	4.15	□□□□□ -1.75
SUP35	YDR172W	YRM1	Q12340	786 aa		4.15	□□□□□ -1.75
SUP35	YDR172W	TEL1	P38110	2787 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	YPT1	P01123	206 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	PHO2	P07269	559 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	PET494	P07390	489 aa	Predicted RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	HXT2	P23585	541 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	ADH7	P25377	361 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	YCR061W	P25639	631 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	EHD3	P28817	500 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	MCM10	P32354	571 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	SNC2	P33328	115 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	SMB1	P40018	196 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	DLS1	P40366	167 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	AVT7	P40501	490 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	TAD2	P47058	250 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	BXI1	P48558	297 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	PHB2	P50085	310 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	MTM1	P53320	366 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SUP35	YDR172W	KAP120	Q02932	1032 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	PRM15	Q03262	622 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	RVB1	Q03940	463 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	YOR385W	Q08909	290 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	FEX2	Q08991	375 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	ATP14	Q12349	124 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	GCN1	P33892	2672 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	PUT1	P09368	476 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	URA6	P15700	204 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	STE4	P18851	423 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	HNM1	P19807	563 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	MAG1	P22134	296 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	MRP20	P32387	263 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	ARO4	P32449	370 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	AGA2	P32781	87 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	FRM2	P37261	193 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	UMP1	P38293	148 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SUP35	YDR172W	PTI1	P39927	425 aa	Predicted RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	SHO1	P40073	367 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	YJR111C	P47148	283 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	SCW4	P53334	386 aa	Known RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	APM1	Q00776	475 aa	Predicted RBP	4.14	□□□□□ -1.75
SUP35	YDR172W	NRG1	Q03125	231 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	YDR249C	Q03787	373 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	MDM30	Q05930	598 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	ARR2	Q06597	130 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	MCH4	Q08268	501 aa		4.14	□□□□□ -1.75
SUP35	YDR172W	BLM10	P43583	2143 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	CHO1	P08456	276 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	MSS1	P32559	526 aa	Predicted RBP	4.13	□□□□□ -1.75
SUP35	YDR172W	SUA5	P32579	426 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	REC104	P33323	182 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	PAN3	P36102	679 aa	Predicted RBP	4.13	□□□□□ -1.75
SUP35	YDR172W	MRPL27	P36526	146 aa	Predicted RBP	4.13	□□□□□ -1.75
SUP35	YDR172W	UBS1	P38290	277 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	YER010C	P40011	234 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	ERJ5	P43613	295 aa	Predicted RBP	4.13	□□□□□ -1.75
SUP35	YDR172W	YHC3	P47040	408 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	PGU1	P47180	361 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	BSC5	P53755	489 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	INN1	P53901	409 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	CGI121	Q03705	181 aa	Known RBP	4.13	□□□□□ -1.75
SUP35	YDR172W	NUP53	Q03790	475 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	FEX1	Q08913	375 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	YJR112W-A	Q3E743	109 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms