RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 LNP1A1A4G5 178 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SMCO2A6NFE2 343 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 CHMP2AO43633 222 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 LRG1P02750 347 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SRGAP2CP0DJJ0 459 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 RXRAP19793 462 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SFNP31947 248 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 OR1D2P34982 312 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 C19orf57Q0VDD7 668 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 RAB33AQ14088 237 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 UGCGQ16739 394 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 UAP1L1Q3KQV9 507 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 PRR16Q569H4 304 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 XKR3Q5GH77 459 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 PPP1R18Q6NYC8 613 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 CASC1Q6TDU7 716 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 VITQ6UXI7 678 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 TMTC2Q8N394 836 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SYNPOQ8N3V7 929 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 DEFB124Q8NES8 71 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 ADAM32Q8TC27 787 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 HASPINQ8TF76 798 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 ASB16Q96NS5 453 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 CORO1BQ9BR76 489 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SH2D3AQ9BRG2 576 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 NIFKQ9BYG3 293 aaKnown RBP12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 MIOSQ9NXC5 875 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SLC8A2Q9UPR5 921 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 GIT1Q9Y2X7 761 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 HES2Q9Y543 173 aa12.29□□□□□ -0.44
PTP4A1-207ENST00000639568 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 E7EWF7 191 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 ADAM12O43184 909 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 EXTL3O43909 919 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 MAFO75444 373 aaPredicted RBP12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 CYP3A4P08684 503 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 CYP21A2P08686 494 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 VIPR2P41587 438 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 JAK3P52333 1124 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 PLK5Q496M5 336 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 CYP4A22Q5TCH4 519 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 PDZD4Q76G19 769 aaPredicted RBP12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 NAV2Q8IVL1 2488 aa12.28□□□□□ -0.44
PTP4A1-207ENST00000639568 TMEM150BA6NC51 233 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 H0Y626 953 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 MICAL2O94851 1124 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 TRIM16O95361 564 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 HOXC13P31276 330 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 ELF1P32519 619 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 SIM1P81133 766 aaPredicted RBP12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 ELAVL2Q12926 359 aaKnown RBP12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 GRIK3Q13003 919 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 NOTUMQ6P988 496 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 POTEHQ6S545 545 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 TMTC3Q6ZXV5 915 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 RALGPS2Q86X27 583 aaPredicted RBP12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 MFSD6LQ8IWD5 586 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 HNRNPLLQ8WVV9 542 aaKnown RBP12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 SLC7A3Q8WY07 619 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 CCDC51Q96ER9 411 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 LRIG1Q96JA1 1093 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 EIF2AQ9BY44 585 aaKnown RBP12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 SLC12A7Q9Y666 1083 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 SDK1Q7Z5N4 2213 aa12.27□□□□□ -0.45
PTP4A1-207ENST00000639568 BCLAF3A2AJT9 711 aaKnown RBP12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 WDR27A2RRH5 827 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 PRRG1O14668 218 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 GAS7O60861 476 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 ATG13O75143 517 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 AXLP30530 894 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 SOX9P48436 509 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 CLK2P49760 499 aaKnown RBP12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 ANTXR2P58335 489 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 SPIRE1Q08AE8 756 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 PON2Q15165 354 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 RAB11FIP4Q86YS3 637 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 PRPF31Q8WWY3 499 aaKnown RBP12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 E2F7Q96AV8 911 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 TCEAL4Q96EI5 215 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 DUSP15Q9H1R2 295 aaPredicted RBP12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 SLITRK6Q9H5Y7 841 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 MINDY3Q9H8M7 445 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 PARP2Q9UGN5 583 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 CDY1Q9Y6F8 540 aa12.26□□□□□ -0.45
PTP4A1-207ENST00000639568 MYBPHLA2RUH7 354 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 hCG_1984214I3L0E3 225 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 AKAP5P24588 427 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 GBP1P32455 592 aa12.25□□□□□ -0.45
PTP4A1-207ENST00000639568 TUSC3Q13454 348 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms