RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 OGTO15294 1046 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 TPD52L2O43399 206 aaKnown RBP7.11□□□□□ -1.27
RTTN-215ENST00000639487 MAN1A1P33908 653 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 LAMTOR4Q0VGL1 99 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 PPFIA1Q13136 1202 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 ZKSCAN8Q15776 578 aaPredicted RBP7.11□□□□□ -1.27
RTTN-215ENST00000639487 UGCGQ16739 394 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 VARS2Q5ST30 1063 aaKnown RBP7.11□□□□□ -1.27
RTTN-215ENST00000639487 KRT79Q5XKE5 535 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 KIAA1841Q6NSI8 718 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 TTI2Q6NXR4 508 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 TCEAL8Q8IYN2 117 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 SYNPOQ8N3V7 929 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 OXER1Q8TDS5 423 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
RTTN-215ENST00000639487 CALML4Q96GE6 196 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 GPR88Q9GZN0 384 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 DNAI2Q9GZS0 605 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 DNM3Q9UQ16 869 aa7.11□□□□□ -1.27
RTTN-215ENST00000639487 CEP192Q8TEP8 1941 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 TRPA1O75762 1119 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 CTSAP10619 480 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 TXLNAP40222 546 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 DNM2P50570 870 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PTP4A2Q12974 167 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PTGDRQ13258 359 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 ACAP1Q15027 740 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 HSDL1Q3SXM5 330 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 CFAP221Q4G0U5 840 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 CABP7Q86V35 215 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 COLGALT1Q8NBJ5 622 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 NT5C3BQ969T7 300 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PGBD1Q96JS3 809 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 OSGEPQ9NPF4 335 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 FBXW11Q9UKB1 542 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 NFE2L3Q9Y4A8 694 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PROB1E7EW31 1015 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 CPLX1O14810 134 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 TDP2O95551 362 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 LSM8O95777 96 aaKnown RBP7.1□□□□□ -1.27
RTTN-215ENST00000639487 TAL1P17542 331 aaPredicted RBP7.1□□□□□ -1.27
RTTN-215ENST00000639487 TEAD1P28347 426 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 DPP6P42658 865 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 HAND2P61296 217 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PTGISQ16647 500 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PRSS36Q5K4E3 855 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 JAKMIP3Q5VZ66 844 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PHLDB3Q6NSJ2 640 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 METTL3Q86U44 580 aaKnown RBP7.1□□□□□ -1.27
RTTN-215ENST00000639487 CCDC65Q8IXS2 484 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 SDR16C5Q8N3Y7 309 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 NIPA2Q8N8Q9 360 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 HELQQ8TDG4 1101 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PAGE5Q96GU1 130 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 TTC12Q9H892 705 aaPredicted RBP7.1□□□□□ -1.27
RTTN-215ENST00000639487 PARVGQ9HBI0 331 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 GPHNQ9NQX3 736 aaPredicted RBP7.1□□□□□ -1.27
RTTN-215ENST00000639487 STARD7Q9NQZ5 370 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 VPS54Q9P1Q0 977 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PCDHA7Q9UN72 937 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 TCRBV5S1A1TA0A578 114 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 BTBD18B2RXH4 712 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PPP1R3GB7ZBB8 358 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 TOR1BO14657 336 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 C4BPAP04003 597 aaKnown RBP7.1□□□□□ -1.27
RTTN-215ENST00000639487 PLA2G4BP0C869 781 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 TAZQ16635 292 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 UPP1Q16831 310 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 EFHC2Q5JST6 749 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 C1orf220Q5T0J3 134 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 HEATR3Q7Z4Q2 680 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 USP37Q86T82 979 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 HERC6Q8IVU3 1022 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 FBXO16Q8IX29 292 aaPredicted RBP7.1□□□□□ -1.27
RTTN-215ENST00000639487 FAM174AQ8TBP5 190 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 FAM117AQ9C073 453 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PHACTR1Q9C0D0 580 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PLEKHA4Q9H4M7 779 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 AZI2Q9H6S1 392 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 PCDHB6Q9Y5E3 794 aa7.1□□□□□ -1.27
RTTN-215ENST00000639487 FAM196BA6NMK8 535 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 BHMG1C9JSJ3 638 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 H7C4K7 107 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 SOD2P04179 222 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 CCNE1P24864 410 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 SPAG1Q07617 926 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 C10orf76Q5T2E6 689 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 ELMSAN1Q6PJG2 1045 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 MICU3Q86XE3 530 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 CCDC117Q8IWD4 279 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 TRIM59Q8IWR1 403 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 FBXW7Q969H0 707 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 C18orf25Q96B23 403 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 OTUB2Q96DC9 234 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 B3GNT4Q9C0J1 378 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 WDR6Q9NNW5 1121 aaKnown RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 ZNF219Q9P2Y4 722 aaPredicted RBP7.09□□□□□ -1.27
RTTN-215ENST00000639487 FBXO10Q9UK96 956 aa7.09□□□□□ -1.27
RTTN-215ENST00000639487 USP3Q9Y6I4 520 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms